RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 CDK15Q96Q40 435 aa17.71■□□□□ 0.43
VARS2-206ENST00000473916 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.71■□□□□ 0.43
VARS2-206ENST00000473916 KCTD5Q9NXV2 234 aa17.71■□□□□ 0.43
VARS2-206ENST00000473916 COPG1Q9Y678 874 aaKnown RBP17.71■□□□□ 0.43
VARS2-206ENST00000473916 ZFC3H1O60293 1989 aaKnown RBP17.71■□□□□ 0.42
VARS2-206ENST00000473916 WNT9AO14904 365 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 AZIN1O14977 448 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 TAPBPO15533 448 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 SOD1P00441 154 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 OR56A5P0C7T3 313 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 HNRNPH1P31943 449 aaKnown RBP17.71■□□□□ 0.42
VARS2-206ENST00000473916 CPOXP36551 454 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 CTSCP53634 463 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 INHBCP55103 352 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 SLC25A3Q00325 362 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 RBBP7Q16576 425 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 ZNF284Q2VY69 593 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 CLYBLQ8N0X4 340 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 DDHD1Q8NEL9 900 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 TWIST2Q8WVJ9 160 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 C19orf60Q96EN9 201 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 DTD2Q96FN9 168 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 DCUN1D1Q96GG9 259 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 CLPTM1LQ96KA5 538 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 PANX3Q96QZ0 392 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 ZSCAN5AQ9BUG6 496 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 FAM126AQ9BYI3 521 aaPredicted RBP17.71■□□□□ 0.42
VARS2-206ENST00000473916 OARD1Q9Y530 152 aa17.71■□□□□ 0.42
VARS2-206ENST00000473916 PIP5K1BO14986 540 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 ATP6V1G2O95670 118 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 C6P13671 934 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 NFKBIAP25963 317 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 P2RY2P41231 377 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 GRIA2P42262 883 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 GDF5P43026 501 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 HSPA7P48741 367 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 MXRA7P84157 204 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 CNTN1Q12860 1018 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 TXNDC11Q6PKC3 985 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 AFAP1L2Q8N4X5 818 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 RASGEF1AQ8N9B8 481 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 BTN2A2Q8WVV5 523 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 HGH1Q9BTY7 390 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 NFKBIL1Q9UBC1 381 aaPredicted RBP17.7■□□□□ 0.42
VARS2-206ENST00000473916 STON1Q9Y6Q2 735 aa17.7■□□□□ 0.42
VARS2-206ENST00000473916 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.7■□□□□ 0.42
VARS2-206ENST00000473916 RAD51BO15315 384 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 MAGEC1O60732 1142 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 RECQL5O94762 991 aaPredicted RBP17.69■□□□□ 0.42
VARS2-206ENST00000473916 COX4I1P13073 169 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 MSH3P20585 1137 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 COPAP53621 1224 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 TCHHL1Q5QJ38 904 aaPredicted RBP17.69■□□□□ 0.42
VARS2-206ENST00000473916 LILRA3Q8N6C8 439 aaPredicted RBP17.69■□□□□ 0.42
VARS2-206ENST00000473916 PDPRQ8NCN5 879 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 CEP70Q8NHQ1 597 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 HMGCLL1Q8TB92 370 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 STON2Q8WXE9 905 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 GLYATL1Q969I3 302 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 MSLNLQ96KJ4 702 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 RIPOR3Q96MK2 946 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 TMEM79Q9BSE2 394 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 BAIAP2L1Q9UHR4 511 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 TRPM6Q9BX84 2022 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 APODP05090 189 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 FGF4P08620 206 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 LINC00032P0C843 101 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 GALK1P51570 392 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 SATB1Q01826 763 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 GBX1Q14549 363 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 TTLL9Q3SXZ7 439 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 SCIMPQ6UWF3 145 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 ERN2Q76MJ5 926 aaKnown RBP17.69■□□□□ 0.42
VARS2-206ENST00000473916 GOLGA7Q7Z5G4 137 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 SNX32Q86XE0 403 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 TMPRSS6Q8IU80 811 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 CHPFQ8IZ52 775 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 CPSF7Q8N684 471 aaKnown RBP17.69■□□□□ 0.42
VARS2-206ENST00000473916 ACTRT2Q8TDY3 377 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 MCUR1Q96AQ8 359 aa17.69■□□□□ 0.42
VARS2-206ENST00000473916 NOL11Q9H8H0 719 aaKnown RBP17.69■□□□□ 0.42
VARS2-206ENST00000473916 PTBP2Q9UKA9 531 aaKnown RBP17.69■□□□□ 0.42
VARS2-206ENST00000473916 CNOT6Q9ULM6 557 aaKnown RBP17.69■□□□□ 0.42
VARS2-206ENST00000473916 NUMA1Q14980 2115 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 TSPAN6O43657 245 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 OR4F21O95013 312 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 BMP8BP34820 402 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 EIF2DP41214 584 aaKnown RBP17.68■□□□□ 0.42
VARS2-206ENST00000473916 ADGRE1Q14246 886 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 LETMD1Q6P1Q0 360 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 CHSY3Q70JA7 882 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 LARP4Q71RC2 724 aaKnown RBP eCLIP17.68■□□□□ 0.429e-7■■□□□ 13.7
VARS2-206ENST00000473916 DDIASQ8IXT1 998 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 SKA2Q8WVK7 121 aaPredicted RBP17.68■□□□□ 0.42
VARS2-206ENST00000473916 ASB2Q96Q27 587 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 EGFL8Q99944 293 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 DENND2DQ9H6A0 471 aaPredicted RBP17.68■□□□□ 0.42
VARS2-206ENST00000473916 AKTIPQ9H8T0 292 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 DYRK4Q9NR20 520 aa17.68■□□□□ 0.42
VARS2-206ENST00000473916 SERGEFQ9UGK8 458 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms