RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 TRIM48Q8IWZ4 208 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 RCBTB1Q8NDN9 531 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
PTCD3-210ENST00000473829 OR6P1Q8NGX9 317 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 OR4L1Q8NH43 312 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 OR10G6Q8NH81 332 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 WDR36Q8NI36 951 aaKnown RBP18.55■□□□□ 0.56
PTCD3-210ENST00000473829 HM13Q8TCT9 377 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 SH3KBP1Q96B97 665 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 CCDC74BQ96LY2 380 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 TRIM56Q9BRZ2 755 aaKnown RBP18.55■□□□□ 0.56
PTCD3-210ENST00000473829 KIFC1Q9BW19 673 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 WWP1Q9H0M0 922 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 UCK1Q9HA47 277 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 SLC40A1Q9NP59 571 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 POT1Q9NUX5 634 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 OGFRQ9NZT2 677 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 PCDHGA8Q9Y5G5 932 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 CFAP20Q9Y6A4 193 aaKnown RBP18.55■□□□□ 0.56
PTCD3-210ENST00000473829 CFAP47Q6ZTR5 3102 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 GOLGA8MH3BSY2 632 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 AP3B1O00203 1094 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 ZW10O43264 779 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 DUX1O43812 170 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 OR1I1O60431 355 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 THRAP10827 490 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 ARNTP27540 789 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 HALP42357 657 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 LIMK2P53671 638 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 EPHA4P54764 986 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 GPR18Q14330 331 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 TBC1D25Q3MII6 688 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 RAB11FIP2Q7L804 512 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 LDB1Q86U70 411 aaPredicted RBP18.54■□□□□ 0.56
PTCD3-210ENST00000473829 AGGF1Q8N302 714 aaeCLIP18.54■□□□□ 0.56
PTCD3-210ENST00000473829 NAT8LQ8N9F0 302 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 AVL9Q8NBF6 648 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 OR4D9Q8NGE8 314 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 SLCO2A1Q92959 643 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 CXorf40BQ96DE9 158 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 MFSD3Q96ES6 412 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 AHCYL2Q96HN2 611 aaKnown RBP18.54■□□□□ 0.56
PTCD3-210ENST00000473829 SGSM3Q96HU1 749 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 RMDN2Q96LZ7 410 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 INSM2Q96T92 566 aaPredicted RBP18.54■□□□□ 0.56
PTCD3-210ENST00000473829 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.54■□□□□ 0.56
PTCD3-210ENST00000473829 STRADBQ9C0K7 418 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 MRM3Q9HC36 420 aaKnown RBP18.54■□□□□ 0.56
PTCD3-210ENST00000473829 PCYOX1Q9UHG3 505 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 SOX13Q9UN79 622 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 LOXL2Q9Y4K0 774 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 PKD1L2Q7Z442 2459 aa18.54■□□□□ 0.56
PTCD3-210ENST00000473829 TMX2-CTNND1H3BSU7 103 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 PLD2O14939 933 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 POLBP06746 335 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 MTHFD1P11586 935 aaKnown RBP18.53■□□□□ 0.56
PTCD3-210ENST00000473829 ITIH1P19827 911 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 NSG1P42857 185 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 PPM1FP49593 454 aaPredicted RBP18.53■□□□□ 0.56
PTCD3-210ENST00000473829 PTK6Q13882 451 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 PPP1R7Q15435 360 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 RNASEH2BQ5TBB1 312 aaKnown RBP18.53■□□□□ 0.56
PTCD3-210ENST00000473829 IGF2-ASQ6U949 168 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 KLHL7Q8IXQ5 586 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 CFAP206Q8IYR0 622 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 FBXO39Q8N4B4 442 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 MCUQ8NE86 351 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 JPH3Q8WXH2 748 aaPredicted RBP18.53■□□□□ 0.56
PTCD3-210ENST00000473829 SLC46A1Q96NT5 459 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 SERPINB12Q96P63 405 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 CCM2Q9BSQ5 444 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 ZMYND15Q9H091 742 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 COG4Q9H9E3 785 aa18.53■□□□□ 0.56
PTCD3-210ENST00000473829 IMP3Q9NV31 184 aaKnown RBP18.53■□□□□ 0.56
PTCD3-210ENST00000473829 CACNA1BQ00975 2339 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 C17orf113A0A1B0GUU1 675 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 KLHL33A6NCF5 533 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 AP2A2O94973 939 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 TNFSF15O95150 251 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 SLC35G4P0C7Q5 338 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 TYRP1P17643 537 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 ETV5P41161 510 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 MAGEA3P43357 314 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 SARNPP82979 210 aaKnown RBP18.52■□□□□ 0.56
PTCD3-210ENST00000473829 EIF3IQ13347 325 aaKnown RBP18.52■□□□□ 0.56
PTCD3-210ENST00000473829 FASTKD1Q53R41 847 aaKnown RBP18.52■□□□□ 0.56
PTCD3-210ENST00000473829 TMEM71Q6P5X7 295 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 SNIP1Q8TAD8 396 aaKnown RBP18.52■□□□□ 0.56
PTCD3-210ENST00000473829 NCSTNQ92542 709 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 RSC1A1Q92681 617 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTCD3-210ENST00000473829 C12orf66Q96MD2 445 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 CATSPERZQ9NTU4 200 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 ACSL5Q9ULC5 683 aa18.52■□□□□ 0.56
PTCD3-210ENST00000473829 CDRT15L2A8MXV6 281 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 MLNP12872 115 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 IVDP26440 423 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 PDHA2P29803 388 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 PREPP48147 710 aa18.51■□□□□ 0.55
PTCD3-210ENST00000473829 GFERP55789 205 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms