RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 DGKQP52824 942 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 TMBIM6P55061 237 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 MBTPS1Q14703 1052 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 CRY1Q16526 586 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 SLC44A4Q53GD3 710 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 LETMD1Q6P1Q0 360 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 GLB1LQ6UWU2 654 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 ITFG1Q8TB96 612 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 LINGO1Q96FE5 620 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 LHPPQ9H008 270 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 CORINQ9Y5Q5 1042 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 KLK8O60259 260 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 IGLV3-27P01718 113 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 IL7RP16871 459 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 NFKBIAP25963 317 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 ERVPABLB-1P60509 514 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 ATP1A4Q13733 1029 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 TXNDC11Q6PKC3 985 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 SLC15A4Q8N697 577 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 CD274Q9NZQ7 290 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 NT5C1B-RDH14C9J2C7 533 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 BCL10O95999 233 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 ZNF12P17014 697 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 JUNBP17275 347 aaPredicted RBP20.82■□□□□ 0.92
COL18A1-207ENST00000473212 GNA12Q03113 381 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 LINGO4Q6UY18 593 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 RNF19BQ6ZMZ0 732 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 R3HCC1LQ7Z5L2 792 aaKnown RBP20.82■□□□□ 0.92
COL18A1-207ENST00000473212 CENPSQ8N2Z9 138 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 NKAPQ8N5F7 415 aaKnown RBP20.82■□□□□ 0.92
COL18A1-207ENST00000473212 COQ6Q9Y2Z9 468 aa20.82■□□□□ 0.92
COL18A1-207ENST00000473212 MKI67P46013 3256 aaKnown RBP20.82■□□□□ 0.92
COL18A1-207ENST00000473212 E2F3O00716 465 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 ADAMTS4O75173 837 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 KCNH1O95259 989 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 PRAMEF12O95522 483 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 G6PDP11413 515 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 MTHFRP42898 656 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 IST1P53990 364 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 CBX3Q13185 183 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 NFE2Q16621 373 aaPredicted RBP20.81■□□□□ 0.92
COL18A1-207ENST00000473212 AFTPHQ6ULP2 937 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 GPSM1Q86YR5 675 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 DPP10Q8N608 796 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 CD200R1Q8TD46 325 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 CSF3RQ99062 836 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 MGME1Q9BQP7 344 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 TOR3AQ9H497 397 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 RIMKLBQ9ULI2 386 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 TULP3O75386 442 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 KATNA1O75449 491 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 NPPAP01160 153 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 ANXA6P08133 673 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 RAP2AP10114 183 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 MC4RP32245 332 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 PIK3CGP48736 1102 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 DUSP4Q13115 394 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 BFSP2Q13515 415 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 ANKRD34AQ69YU3 496 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 GALNT18Q6P9A2 607 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 THAP5Q7Z6K1 395 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 FAM86B1Q8N7N1 296 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 SLC22A17Q8WUG5 538 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 FUBP3Q96I24 572 aaKnown RBP eCLIP20.81■□□□□ 0.92
COL18A1-207ENST00000473212 CGREF1Q99674 301 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 ACTL8Q9H568 366 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 CARS2Q9HA77 564 aaKnown RBP20.81■□□□□ 0.92
COL18A1-207ENST00000473212 PFDN4Q9NQP4 134 aa20.81■□□□□ 0.92
COL18A1-207ENST00000473212 TLR8Q9NR97 1041 aaKnown RBP20.81■□□□□ 0.92
COL18A1-207ENST00000473212 K7EPI3 171 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 ABCB7O75027 752 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 PRSS23O95084 383 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 GJB5O95377 273 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 CNPP09543 421 aaKnown RBP20.8■□□□□ 0.92
COL18A1-207ENST00000473212 CRHBPP24387 322 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 CHRNB3Q05901 458 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 FAM98BQ52LJ0 330 aaKnown RBP20.8■□□□□ 0.92
COL18A1-207ENST00000473212 ZRANB3Q5FWF4 1079 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 CINPQ9BW66 212 aaPredicted RBP20.8■□□□□ 0.92
COL18A1-207ENST00000473212 SMURF2Q9HAU4 748 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 IL37Q9NZH6 218 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 UTS2RQ9UKP6 389 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 CHD5Q8TDI0 1954 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 C1orf232A0A0U1RR37 186 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 F5H5T6 163 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 FUCA1P04066 466 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 CCND3P30281 292 aaPredicted RBP20.8■□□□□ 0.92
COL18A1-207ENST00000473212 CA5AP35218 305 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 GGT5P36269 586 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 ZNF157P51786 506 aaPredicted RBP20.8■□□□□ 0.92
COL18A1-207ENST00000473212 MLLT10P55197 1068 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 YBEYP58557 167 aaPredicted RBP20.8■□□□□ 0.92
COL18A1-207ENST00000473212 CBX2Q14781 532 aaPredicted RBP20.8■□□□□ 0.92
COL18A1-207ENST00000473212 NR1D2Q14995 579 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 IMPG1Q17R60 797 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 IL27RAQ6UWB1 636 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 FAM126BQ8IXS8 530 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 ZBTB8BQ8NAP8 495 aaPredicted RBP20.8■□□□□ 0.92
COL18A1-207ENST00000473212 NRBF2Q96F24 287 aa20.8■□□□□ 0.92
COL18A1-207ENST00000473212 TRMT6Q9UJA5 497 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms