RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 LDB2O43679 373 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 SLC4A1P02730 911 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 STSP08842 583 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 CDH3P22223 829 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 HNRNPH3P31942 346 aaKnown RBP13.59□□□□□ -0.23
SMURF1-203ENST00000472627 RPE65Q16518 533 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 CYP2A13Q16696 494 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 QPCTQ16769 361 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 VWA2Q5GFL6 755 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 CCDC122Q5T0U0 273 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 B3GNTL1Q67FW5 361 aaPredicted RBP13.59□□□□□ -0.23
SMURF1-203ENST00000472627 MTFR2Q6P444 385 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 FAM180AQ6UWF9 173 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 PARP9Q8IXQ6 854 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 PPP4R1Q8TF05 950 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 FAR1Q8WVX9 515 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 ZFPM2Q8WW38 1151 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 INPP5DQ92835 1189 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 TRAPPC9Q96Q05 1148 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 TLR10Q9BXR5 811 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 ZNF552Q9H707 407 aaPredicted RBP13.59□□□□□ -0.23
SMURF1-203ENST00000472627 ATP13A2Q9NQ11 1180 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 IMP3Q9NV31 184 aaKnown RBP13.59□□□□□ -0.23
SMURF1-203ENST00000472627 ETNK2Q9NVF9 386 aa13.59□□□□□ -0.23
SMURF1-203ENST00000472627 NOVA2Q9UNW9 492 aaKnown RBP13.59□□□□□ -0.23
SMURF1-203ENST00000472627 A0A1W2PQJ5 194 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 TMEM150CB9EJG8 249 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 E7EQ34 232 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 MATN3O15232 486 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 PRLP01236 227 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 FERP16591 822 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 TSFMP43897 325 aaKnown RBP13.58□□□□□ -0.24
SMURF1-203ENST00000472627 PREPP48147 710 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 KLK7P49862 253 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 DMPKQ09013 629 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 CDC16Q13042 620 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 KRT81Q14533 505 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
SMURF1-203ENST00000472627 FAM69BQ5VUD6 431 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 LCN10Q6JVE6 187 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 CYP4V2Q6ZWL3 525 aaPredicted RBP13.58□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF547Q8IVP9 402 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 GPR135Q8IZ08 494 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 ANKRD20A12PQ8NF67 263 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 GPR150Q8NGU9 434 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 GRHL3Q8TE85 626 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 MAML1Q92585 1016 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
SMURF1-203ENST00000472627 FATE1Q969F0 183 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF653Q96CK0 615 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 GBP5Q96PP8 586 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 VPS35Q96QK1 796 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 SRPK1Q96SB4 655 aaKnown RBP13.58□□□□□ -0.24
SMURF1-203ENST00000472627 GPR63Q9BZJ6 419 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
SMURF1-203ENST00000472627 C1GALT1Q9NS00 363 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 SAMSN1Q9NSI8 373 aaKnown RBP13.58□□□□□ -0.24
SMURF1-203ENST00000472627 NDOR1Q9UHB4 597 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 WDR37Q9Y2I8 494 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 CELSR1Q9NYQ6 3014 aa13.58□□□□□ -0.24
SMURF1-203ENST00000472627 OR6C74A6NCV1 312 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 SLC9B1P1A6NJY1 282 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 TMCO5BA8MYB1 307 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 E2F3O00716 465 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 EPHB6O15197 1021 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
SMURF1-203ENST00000472627 MTX2O75431 263 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 CAPN1P07384 714 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 MSL3P1P0C860 447 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 MTHFD1P11586 935 aaKnown RBP13.57□□□□□ -0.24
SMURF1-203ENST00000472627 HLA-DPA1P20036 260 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 CCNCP24863 283 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 SOX8P57073 446 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 GALNT2Q10471 571 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 TMEM115Q12893 351 aaPredicted RBP13.57□□□□□ -0.24
SMURF1-203ENST00000472627 ABRQ12979 859 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 AIMP2Q13155 320 aaKnown RBP13.57□□□□□ -0.24
SMURF1-203ENST00000472627 KRT33BQ14525 404 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 PTCHD3Q3KNS1 767 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 CT47A1Q5JQC4 288 aaPredicted RBP13.57□□□□□ -0.24
SMURF1-203ENST00000472627 B4GALNT4Q76KP1 1039 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 BCORP1Q8N888 145 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 GPR26Q8NDV2 337 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 CPLX3Q8WVH0 158 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 TRIM11Q96F44 468 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 EPS8L2Q9H6S3 715 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 OLAHQ9NV23 265 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 P4HTMQ9NXG6 502 aa13.57□□□□□ -0.24
SMURF1-203ENST00000472627 PTRH2Q9Y3E5 179 aaKnown RBP13.57□□□□□ -0.24
SMURF1-203ENST00000472627 PDZD2O15018 2839 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 ZFHX3Q15911 3703 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 MX2P20592 715 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 NDUFS1P28331 727 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 SSTR2P30874 369 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 CD86P42081 329 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 GALNT3Q14435 633 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 ZNF169Q14929 603 aaPredicted RBP13.56□□□□□ -0.24
SMURF1-203ENST00000472627 TLR1Q15399 786 aa13.56□□□□□ -0.24
SMURF1-203ENST00000472627 DPCR1Q3MIW9 517 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms