RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 CDH17Q12864 832 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 SLC1A5Q15758 541 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 KYNUQ16719 465 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 CCDC38Q502W7 563 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 RAET1GQ6H3X3 334 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 SLC30A9Q6PML9 568 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 CES3Q6UWW8 571 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 ZFAND4Q86XD8 727 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 NRSN1Q8IZ57 195 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 FBXO36Q8NEA4 188 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 LPCAT1Q8NF37 534 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 UHMK1Q8TAS1 419 aaKnown RBP11.4□□□□□ -0.58
HLA-C-206ENST00000470363 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.4□□□□□ -0.58
HLA-C-206ENST00000470363 CAVIN3Q969G5 261 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 PMEPA1Q969W9 287 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 AP2M1Q96CW1 435 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 EID2BQ96D98 161 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 SGF29Q96ES7 293 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 CFAP36Q96G28 342 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 SPRY4Q9C004 299 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 CDC42EP4Q9H3Q1 356 aaKnown RBP11.4□□□□□ -0.58
HLA-C-206ENST00000470363 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 NINJ2Q9NZG7 142 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 PCDHGA3Q9Y5H0 932 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 MAD1L1Q9Y6D9 718 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 TEX264Q9Y6I9 313 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 A6NCN8 305 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 SDR42E2A6NKP2 422 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 RHPN2P1A8MT19 583 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 EIF3HO15372 352 aaKnown RBP eCLIP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 CLDN7O95471 211 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 ITGB2P05107 769 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 THRAP10827 490 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 MLNP12872 115 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 CSF2RBP32927 897 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 GPR1P46091 355 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 FASLGP48023 281 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 NPY2RP49146 381 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 RPL26P61254 145 aaKnown RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 POU6F1Q14863 301 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 SLMAPQ14BN4 828 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 SLC14A2Q15849 920 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 UAP1Q16222 522 aaPredicted RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 QPCTQ16769 361 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 AMZ1Q400G9 498 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 DNAJC21Q5F1R6 531 aaKnown RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 NKAIN2Q5VXU1 208 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 CASC4Q6P4E1 433 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 XKR5Q6UX68 686 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 MICALCLQ6ZW33 695 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 TRIM74Q86UV6 250 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 SFRP1Q8N474 314 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 PAF1Q8N7H5 531 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 RCBTB1Q8NDN9 531 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 OR4D9Q8NGE8 314 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 PYROXD1Q8WU10 500 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 UBLCP1Q8WVY7 318 aaPredicted RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 OR2M4Q96R27 311 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 RIOK2Q9BVS4 552 aaKnown RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 EPB41L4BQ9H329 900 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 SUDS3Q9H7L9 328 aaPredicted RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 BFARQ9NZS9 450 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 TMEM9Q9P0T7 183 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 RPL26L1Q9UNX3 145 aaKnown RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 SPO11Q9Y5K1 396 aa11.39□□□□□ -0.59
HLA-C-206ENST00000470363 OAS3Q9Y6K5 1087 aaKnown RBP11.39□□□□□ -0.59
HLA-C-206ENST00000470363 ANKRD66B4E2M5 251 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 J3QKU1 62 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 AGRPO00253 132 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 ACSL3O95573 720 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 EPOP01588 193 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 PYGLP06737 847 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 HLA-DPA1P20036 260 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 CD82P27701 267 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 SSTR1P30872 391 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 HSD17B3P37058 310 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 ACTR1BP42025 376 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 SPINT3P49223 89 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 GPX6P59796 221 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 ACTR1AP61163 376 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 MSLNQ13421 630 aaPredicted RBP11.38□□□□□ -0.59
HLA-C-206ENST00000470363 TRA2AQ13595 282 aaKnown RBP eCLIP11.38□□□□□ -0.59
HLA-C-206ENST00000470363 LRP8Q14114 963 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 SEPT6Q14141 434 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 PHF19Q5T6S3 580 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 HENMT1Q5T8I9 393 aaKnown RBP11.38□□□□□ -0.59
HLA-C-206ENST00000470363 PALM2Q8IXS6 379 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 BMPERQ8N8U9 685 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 NKD1Q969G9 470 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 STAMBPL1Q96FJ0 436 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 CCDC74BQ96LY2 380 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 TAAR9Q96RI9 348 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 EBNA1BP2Q99848 306 aaKnown RBP11.38□□□□□ -0.59
HLA-C-206ENST00000470363 TSPYL1Q9H0U9 437 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 CDH19Q9H159 772 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 VPS37BQ9H9H4 285 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 ARNT2Q9HBZ2 717 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 STARD5Q9NSY2 213 aa11.38□□□□□ -0.59
HLA-C-206ENST00000470363 VPS18Q9P253 973 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms