RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 INHBAP08476 426 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 ALOX12P18054 663 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 GLIPR1P48060 266 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 SPOCK1Q08629 439 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 AIMP2Q13155 320 aaKnown RBP3.7□□□□□ -1.82
BRCA2-202ENST00000470094 CUL4AQ13619 759 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 SFMBT2Q5VUG0 894 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 CLEC17AQ6ZS10 378 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 ENOSF1Q7L5Y1 443 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 DGLUCYQ7Z3D6 616 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 GALNT13Q8IUC8 556 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 KLHDC8BQ8IXV7 354 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 SCYL3Q8IZE3 742 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 SMPDL3BQ92485 455 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 NSUN4Q96CB9 384 aaKnown RBP3.7□□□□□ -1.82
BRCA2-202ENST00000470094 CCDC34Q96HJ3 373 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 C17orf77Q96MU5 243 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 DACH2Q96NX9 599 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 DDOQ99489 341 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 SLX1AQ9BQ83 275 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 SRSF8Q9BRL6 282 aaKnown RBP3.7□□□□□ -1.82
BRCA2-202ENST00000470094 HGH1Q9BTY7 390 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 SYNCQ9H7C4 482 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 ANKEF1Q9NU02 776 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 SLC38A7Q9NVC3 462 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 HAUS2Q9NVX0 235 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 PAG1Q9NWQ8 432 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.7□□□□□ -1.82
BRCA2-202ENST00000470094 GAB2Q9UQC2 676 aa3.7□□□□□ -1.82
BRCA2-202ENST00000470094 OR2M5A3KFT3 312 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 PLK4O00444 970 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 NR3C1P04150 777 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 CFC1BP0CG36 223 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 CFC1P0CG37 223 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 FGF5P12034 268 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 SELLP14151 372 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 DCTP40126 519 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 HADHAP40939 763 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 GARSP41250 739 aaKnown RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 NR2C2P49116 596 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 PPP2R2BQ00005 443 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 GAGE2BQ13066 116 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 KCNC3Q14003 757 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 GAGE2EQ4V326 116 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 WDR38Q5JTN6 314 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 GAGE2AQ6NT46 116 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 PTOV1Q86YD1 416 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 STPG4Q8N801 248 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 LSMEM1Q8N8F7 131 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 ZBTB8BQ8NAP8 495 aaPredicted RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 ZNF473Q8WTR7 871 aaKnown RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 PRMT6Q96LA8 375 aaPredicted RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 MAK16Q9BXY0 300 aaKnown RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 DENND2DQ9H6A0 471 aaPredicted RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 APOBEC3GQ9HC16 384 aaKnown RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 ZBTB20Q9HC78 741 aaPredicted RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 GAGE2DQ9UEU5 116 aa3.69□□□□□ -1.82
BRCA2-202ENST00000470094 EXO1Q9UQ84 846 aaKnown RBP3.69□□□□□ -1.82
BRCA2-202ENST00000470094 SMIM1B2RUZ4 78 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 VILLO15195 856 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 NDUFS4O43181 175 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 SYNCRIPO60506 623 aaKnown RBP3.68□□□□□ -1.82
BRCA2-202ENST00000470094 AMBPP02760 352 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 GNAZP19086 355 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 MSH3P20585 1137 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 PSMB10P40306 273 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 MMP15P51511 669 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 CRIP2P52943 208 aaPredicted RBP3.68□□□□□ -1.82
BRCA2-202ENST00000470094 MFAP4P55083 255 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 POU5F1Q01860 360 aaKnown RBP3.68□□□□□ -1.82
BRCA2-202ENST00000470094 TECRLQ5HYJ1 363 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 ADAM5Q6NVV9 412 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 MCEMP1Q8IX19 187 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 RPAP2Q8IXW5 612 aaPredicted RBP3.68□□□□□ -1.82
BRCA2-202ENST00000470094 SEMA4DQ92854 862 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 ZNF524Q96C55 264 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 ZNF501Q96CX3 271 aaPredicted RBP3.68□□□□□ -1.82
BRCA2-202ENST00000470094 SAT2Q96F10 170 aaPredicted RBP3.68□□□□□ -1.82
BRCA2-202ENST00000470094 BICC1Q9H694 974 aaKnown RBP3.68□□□□□ -1.82
BRCA2-202ENST00000470094 DNAJB4Q9UDY4 337 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 PCDHGA5Q9Y5G8 931 aa3.68□□□□□ -1.82
BRCA2-202ENST00000470094 LRRC72A6NJI9 287 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 AGAP14A8MT82 685 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 B4DLN1 442 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 BLOC1S5-TXNDC5H3BN57 136 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 CLIC2O15247 247 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 EDIL3O43854 480 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 PCDH7O60245 1069 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 CIDEAO60543 219 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 PLOD3O60568 738 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 MITFO75030 526 aaPredicted RBP3.67□□□□□ -1.82
BRCA2-202ENST00000470094 GAS8-AS1O95177 125 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 TUBBP07437 444 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 PORP16435 677 aaPredicted RBP3.67□□□□□ -1.82
BRCA2-202ENST00000470094 ACTN2P35609 894 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
BRCA2-202ENST00000470094 SNRPEP62304 92 aaKnown RBP3.67□□□□□ -1.82
BRCA2-202ENST00000470094 TUBB4BP68371 445 aa3.67□□□□□ -1.82
BRCA2-202ENST00000470094 MRPS5P82675 430 aaKnown RBP3.67□□□□□ -1.82
BRCA2-202ENST00000470094 MC1RQ01726 317 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms