RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 FAM219BQ5XKK7 198 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 ZNF776Q68DI1 518 aaPredicted RBP17.84■□□□□ 0.45
SMC4-211ENST00000469858 SDE2Q6IQ49 451 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 CYHR1Q6ZMK1 362 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 RALGPS2Q86X27 583 aaPredicted RBP17.84■□□□□ 0.45
SMC4-211ENST00000469858 SLC44A3Q8N4M1 653 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 RASGEF1AQ8N9B8 481 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 ELMO1Q92556 727 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 ASB2Q96Q27 587 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 UBE2ZQ9H832 354 aaPredicted RBP17.84■□□□□ 0.45
SMC4-211ENST00000469858 MID1IP1Q9NPA3 183 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 SEMA4BQ9NPR2 832 aaPredicted RBP17.84■□□□□ 0.45
SMC4-211ENST00000469858 FAM8A1Q9UBU6 413 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 SERGEFQ9UGK8 458 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 CDYLQ9Y232 598 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 OARD1Q9Y530 152 aa17.84■□□□□ 0.45
SMC4-211ENST00000469858 A0A1W2PPC1 479 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 CDK14O94921 469 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 FTH1P02794 183 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 ENO3P13929 434 aaPredicted RBP17.83■□□□□ 0.44
SMC4-211ENST00000469858 NCF2P19878 526 aaPredicted RBP17.83■□□□□ 0.44
SMC4-211ENST00000469858 CTSCP53634 463 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 TAS2R38P59533 333 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 CREB5Q02930 508 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 TMEM115Q12893 351 aaPredicted RBP17.83■□□□□ 0.44
SMC4-211ENST00000469858 SMAD4Q13485 552 aaKnown RBP17.83■□□□□ 0.44
SMC4-211ENST00000469858 STARD3Q14849 445 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 PHKG1Q16816 387 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 FAM91A1Q658Y4 838 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 CLEC6AQ6EIG7 209 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 TRIM74Q86UV6 250 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 IL17RCQ8NAC3 791 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 OR2T3Q8NH03 318 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 SKA2Q8WVK7 121 aaPredicted RBP17.83■□□□□ 0.44
SMC4-211ENST00000469858 KLHL29Q96CT2 875 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 FAR2Q96K12 515 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 EIF2B4Q9UI10 523 aaKnown RBP17.83■□□□□ 0.44
SMC4-211ENST00000469858 CNOT6Q9ULM6 557 aaKnown RBP17.83■□□□□ 0.44
SMC4-211ENST00000469858 TRAF6Q9Y4K3 522 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 ASB1Q9Y576 335 aa17.83■□□□□ 0.44
SMC4-211ENST00000469858 H0YHG0 523 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 SOX1O00570 391 aaPredicted RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 PCDH8O95206 1070 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 COPAP53621 1224 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 RPS14P62263 151 aaKnown RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 ACAD11Q709F0 780 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 TREML1Q86YW5 311 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 VRK3Q8IV63 474 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 DLG3Q92796 817 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 EGFL8Q99944 293 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 CCDC106Q9BWC9 280 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 C1QTNF3Q9BXJ4 246 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 MKRN2Q9H000 416 aaKnown RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 TRPV5Q9NQA5 729 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 PCTPQ9UKL6 214 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 DOCK9Q9BZ29 2069 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 TRPC5OSA6NMA1 111 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 CAPN14A8MX76 684 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 PRR5-ARHGAP8B1AHC4 643 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 QSOX1O00391 747 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 KPNA5O15131 536 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 RNASEH2AO75792 299 aaKnown RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 KLF8O95600 359 aaPredicted RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 ENO1P06733 434 aaKnown RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 ASGR2P07307 311 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 HOXB2P14652 356 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 ARHGAP8P85298 464 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 BTKQ06187 659 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 DPTQ07507 201 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 LCP2Q13094 533 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 GBX1Q14549 363 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 KRT72Q14CN4 511 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 C18orf21Q32NC0 220 aaPredicted RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 LSM12Q3MHD2 195 aaKnown RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 PLEKHS1Q5SXH7 462 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 IER5LQ5T953 404 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 NXNQ6DKJ4 435 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 KIF2BQ8N4N8 673 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 PDPRQ8NCN5 879 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 NSL1Q96IY1 281 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 GABRG3Q99928 467 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 C8orf33Q9H7E9 229 aaPredicted RBP17.82■□□□□ 0.44
SMC4-211ENST00000469858 PRUNE2Q8WUY3 3088 aa17.82■□□□□ 0.44
SMC4-211ENST00000469858 IGLON5A6NGN9 336 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 EIF3FO00303 357 aaPredicted RBP17.81■□□□□ 0.44
SMC4-211ENST00000469858 TSPAN6O43657 245 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 ADAM23O75077 832 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 VCLP18206 1134 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 GRSF1Q12849 480 aaKnown RBP eCLIP17.81■□□□□ 0.442e-14■■■■■ 48.8
SMC4-211ENST00000469858 KIRREL3Q8IZU9 778 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 GANCQ8TET4 914 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 ZNF483Q8TF39 744 aaPredicted RBP17.81■□□□□ 0.44
SMC4-211ENST00000469858 DNASE1L2Q92874 299 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 PTCD3Q96EY7 689 aaKnown RBP17.81■□□□□ 0.44
SMC4-211ENST00000469858 LRCH3Q96II8 777 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 SLC6A17Q9H1V8 727 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 ZBTB26Q9HCK0 441 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 SORCS3Q9UPU3 1222 aa17.81■□□□□ 0.44
SMC4-211ENST00000469858 A0A1B0GTL3 188 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 TMEM202A6NGA9 273 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms