RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 NDUFS1P28331 727 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 VPS41P49754 854 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 RNF144AP50876 292 aaPredicted RBP8.97□□□□□ -0.97
FN1-216ENST00000469569 EPHA4P54764 986 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 TMPRSS15P98073 1019 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 INSM1Q01101 510 aaPredicted RBP8.97□□□□□ -0.97
FN1-216ENST00000469569 ILF2Q12905 390 aaKnown RBP8.97□□□□□ -0.97
FN1-216ENST00000469569 EIF3IQ13347 325 aaKnown RBP8.97□□□□□ -0.97
FN1-216ENST00000469569 MORF4L2Q15014 288 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 TLR1Q15399 786 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 TRIP13Q15645 432 aaPredicted RBP8.97□□□□□ -0.97
FN1-216ENST00000469569 RNF187Q5TA31 235 aaPredicted RBP8.97□□□□□ -0.97
FN1-216ENST00000469569 HES3Q5TGS1 186 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 CDCP2Q5VXM1 449 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 METRNLQ641Q3 311 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 CASC4Q6P4E1 433 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 SERPINA9Q86WD7 417 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 LRRC6Q86X45 466 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 TRIM48Q8IWZ4 208 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 ARL14Q8N4G2 192 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 RASGEF1AQ8N9B8 481 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 OR2L2Q8NH16 312 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 CCL4L1Q8NHW4 92 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 RNF217Q8TC41 542 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 HM13Q8TCT9 377 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 CALML6Q8TD86 181 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 CPT1BQ92523 772 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 HDAC10Q969S8 669 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 LRRC39Q96DD0 335 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 NRSN2Q9GZP1 204 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 DDX47Q9H0S4 455 aaKnown RBP8.97□□□□□ -0.97
FN1-216ENST00000469569 OSGEPL1Q9H4B0 414 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 POT1Q9NUX5 634 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 TMPRSS11EQ9UL52 423 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 SOX13Q9UN79 622 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 KCTD3Q9Y597 815 aa8.97□□□□□ -0.97
FN1-216ENST00000469569 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.97
FN1-216ENST00000469569 CCDC162PA2VCL2 907 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 PDZK1P1A8MUH7 402 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 H3BMM5 538 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 NTN3O00634 580 aaPredicted RBP8.96□□□□□ -0.98
FN1-216ENST00000469569 DNALI1O14645 258 aaPredicted RBP8.96□□□□□ -0.98
FN1-216ENST00000469569 LIN7AO14910 233 aaPredicted RBP8.96□□□□□ -0.98
FN1-216ENST00000469569 KPNA5O15131 536 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 KDM1AO60341 852 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 SNX2O60749 519 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 MTX2O75431 263 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CPNE6O95741 557 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 VIPP01282 170 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 POLBP06746 335 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 GRIA1P42261 906 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CD151P48509 253 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 PRLHRP49683 370 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 HHEXQ03014 270 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 TRA2AQ13595 282 aaKnown RBP eCLIP8.96□□□□□ -0.98
FN1-216ENST00000469569 PTPRCAPQ14761 206 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CCDC38Q502W7 563 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 FNBP1LQ5T0N5 605 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 KCTD16Q68DU8 428 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 KLHL35Q6PF15 583 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CRTC3Q6UUV7 619 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 SYT10Q6XYQ8 523 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 SPRED1Q7Z699 444 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 PRUNE1Q86TP1 453 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 PIM3Q86V86 326 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 ZNF547Q8IVP9 402 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 NAGSQ8N159 534 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 PDIK1LQ8N165 341 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 NAT8LQ8N9F0 302 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 MNS1Q8NEH6 495 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 OR13J1Q8NGT2 312 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 OR10G6Q8NH81 332 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CCDC74AQ96AQ1 378 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CXorf40BQ96DE9 158 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 NXPE2Q96DL1 559 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 SGF29Q96ES7 293 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 AHCYL2Q96HN2 611 aaKnown RBP8.96□□□□□ -0.98
FN1-216ENST00000469569 SLC38A3Q99624 504 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 LRRN3Q9H3W5 708 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CHRAC1Q9NRG0 131 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 TREX1Q9NSU2 369 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CATSPERZQ9NTU4 200 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 PIH1D1Q9NWS0 290 aaKnown RBP8.96□□□□□ -0.98
FN1-216ENST00000469569 SMARCAL1Q9NZC9 954 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 CPNE7Q9UBL6 633 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 DKK4Q9UBT3 224 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 TBC1D29Q9UFV1 150 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 ZMIZ1Q9ULJ6 1067 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 KCNK6Q9Y257 313 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 RNF215Q9Y6U7 377 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 COLEC10Q9Y6Z7 277 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 ASXL3Q9C0F0 2248 aa8.96□□□□□ -0.98
FN1-216ENST00000469569 LRP4O75096 1905 aa8.95□□□□□ -0.98
FN1-216ENST00000469569 A6NCN8 305 aa8.95□□□□□ -0.98
FN1-216ENST00000469569 LILRA5A6NI73 299 aa8.95□□□□□ -0.98
FN1-216ENST00000469569 PRR19A6NJB7 356 aa8.95□□□□□ -0.98
FN1-216ENST00000469569 OR2AG2A6NM03 316 aa8.95□□□□□ -0.98
FN1-216ENST00000469569 IFRD1O00458 451 aaPredicted RBP8.95□□□□□ -0.98
FN1-216ENST00000469569 PRMT5O14744 637 aaPredicted RBP8.95□□□□□ -0.98
FN1-216ENST00000469569 CD3EAPO15446 510 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms