RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 GAGE12FP0CL80 117 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 GAGE12GP0CL81 117 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 GAGE12IP0CL82 117 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 SRCP12931 536 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 TRIM21P19474 475 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 ZNF10P21506 573 aaPredicted RBP3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 SSTR2P30874 369 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 FASLGP48023 281 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 AMPHP49418 695 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 SUOXP51687 545 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 SNRPEP62304 92 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 GAGE1Q13065 139 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 GAGE4Q13068 117 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 GRAPQ13588 217 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 DHX34Q14147 1143 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 SNAPC1Q16533 368 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 FAM98BQ52LJ0 330 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 C1orf141Q5JVX7 400 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 SPECC1Q5M775 1068 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 PAPPA-AS1Q5QFB9 102 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 ERMARDQ5T6L9 678 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 NSUN5P2Q63ZY6 315 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 FAM122CQ6P4D5 195 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 INTS8Q75QN2 995 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 SPAG16Q8N0X2 631 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 BEST3Q8N1M1 668 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 GUF1Q8N442 669 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 FBXO39Q8N4B4 442 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 TTC30BQ8N4P2 665 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 AFAP1Q8N556 730 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 OR6J1Q8NGC5 347 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 HMGCLL1Q8TB92 370 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 TAAR8Q969N4 342 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 DGAT2Q96PD7 388 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 CSF3RQ99062 836 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 HGH1Q9BTY7 390 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 SPATC1LQ9H0A9 340 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 MMP27Q9H306 513 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 LARSQ9P2J5 1176 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 PADI1Q9ULC6 663 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 AMDHD2Q9Y303 409 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 NFS1Q9Y697 457 aa3.18□□□□□ -1.9
SOX2-OT-204ENST00000469278 LOC102723996A0A087X1L8 192 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 IGLV5-52A0A0A0MRZ9 124 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 GPR75-ASB3A0A0A6YYF3 556 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 A0A0U1RQJ8 604 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 A0A1W2PR77 199 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 TRBC2A0A5B9 178 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 TMEM189-UBE2V1I3L0A0 370 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 ANKRD28O15084 1053 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 KCNN4O15554 427 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 NDUFS4O43181 175 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PLPP2O43688 288 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 EXTL3O43909 919 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PRAMEF11O60813 436 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 TBCAO75347 108 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PRLRP16471 622 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 DGKAP23743 735 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 NR2F2P24468 414 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 NMBRP28336 390 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 TMPOP42166 694 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 MMP14P50281 582 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 CSE1LP55060 971 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 CD81P60033 236 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 IRX6P78412 446 aaPredicted RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PMP22Q01453 160 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 BNC1Q01954 994 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 CXCL9Q07325 125 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PLA2G7Q13093 441 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 UBE2V1Q13404 147 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 SNTB1Q13884 538 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 DECR1Q16698 335 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 CCDC96Q2M329 555 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 SETMARQ53H47 684 aaPredicted RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 TCP11X2Q5H9J9 407 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 C18orf63Q68DL7 685 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 KRT39Q6A163 491 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 RPUSD3Q6P087 351 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PAPD4Q6PIY7 484 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 TPRG1Q6ZUI0 275 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 LDB1Q86U70 411 aaPredicted RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 MAP7D3Q8IWC1 876 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PM20D2Q8IYS1 436 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 LYG1Q8N1E2 194 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 RASGEF1CQ8N431 466 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 KCNH5Q8NCM2 988 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 TSPAN14Q8NG11 270 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 OR2AK2Q8NG84 335 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 DUSP19Q8WTR2 217 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PTPMT1Q8WUK0 201 aaPredicted RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 SECTM1Q8WVN6 248 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 TEKT4Q8WW24 435 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 VPS33AQ96AX1 596 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 RMDN1Q96DB5 314 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PGAP3Q96FM1 320 aaPredicted RBP3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 DCTN5Q9BTE1 182 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 OR10A4Q9H209 315 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 KCNK15Q9H427 330 aa3.17□□□□□ -1.9
SOX2-OT-204ENST00000469278 PFDN4Q9NQP4 134 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms