RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ANKS6Q68DC2 871 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 CUZD1Q86UP6 607 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 TRIM74Q86UV6 250 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 ALYREFQ86V81 257 aaKnown RBP18.65■□□□□ 0.58
SMC4-209ENST00000468653 RPLP0P6Q8NHW5 317 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 SKA2Q8WVK7 121 aaPredicted RBP18.65■□□□□ 0.58
SMC4-209ENST00000468653 ASB2Q96Q27 587 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 OARD1Q9Y530 152 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 CDK14O94921 469 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 SRFP11831 508 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 TSPAN8P19075 237 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 CTSCP53634 463 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 TDGQ13569 410 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 SPRED3Q2MJR0 410 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 FBXO48Q5FWF7 155 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 EOGTQ5NDL2 527 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 PTCRAQ6ISU1 281 aaPredicted RBP18.65■□□□□ 0.58
SMC4-209ENST00000468653 TMEM220Q6QAJ8 160 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 EPGNQ6UW88 154 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 CLNKQ7Z7G1 428 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 OR14C36Q8NHC7 312 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 ASZ1Q8WWH4 475 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 SLC2A4RGQ9NR83 387 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 ADAMTS6Q9UKP5 1117 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 MYO10Q9HD67 2058 aa18.64■□□□□ 0.58
SMC4-209ENST00000468653 FCHO1O14526 889 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 FFAR2O15552 330 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 NUAK1O60285 661 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 CCDC22O60826 627 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 PCCBP05166 539 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 PRLHRP49683 370 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 AGTR2P50052 363 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 NAA20P61599 178 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 GTF2H3Q13889 308 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 GBX1Q14549 363 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 PPP1R3AQ16821 1122 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 LEXMQ3ZCV2 418 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 TTC31Q49AM3 519 aaPredicted RBP18.64■□□□□ 0.57
SMC4-209ENST00000468653 KIRREL3Q8IZU9 778 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 SIPA1Q96FS4 1042 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 FAR2Q96K12 515 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 CCM2Q9BSQ5 444 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 OR2AG1Q9H205 316 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 TRIM39Q9HCM9 518 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 SCML1Q9UN30 329 aa18.64■□□□□ 0.57
SMC4-209ENST00000468653 RRP15Q9Y3B9 282 aaKnown RBP18.64■□□□□ 0.57
SMC4-209ENST00000468653 PRR23AA6NEV1 266 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 GRID2O43424 1007 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 GUCA1CO95843 209 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 MPC1LP0DKB6 136 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 VCLP18206 1134 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 CD72P21854 359 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 CLCQ05315 142 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 BNIP1Q12981 228 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 SYTL3Q4VX76 610 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 PNCKQ6P2M8 343 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 ADGRG6Q86SQ4 1221 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 PLA2G15Q8NCC3 412 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 MAPK15Q8TD08 544 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 TRPC4APQ8TEL6 797 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 HIC2Q96JB3 615 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 NSUN5Q96P11 429 aaKnown RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 EGFL8Q99944 293 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 EPHX3Q9H6B9 360 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 ACTR5Q9H9F9 607 aaPredicted RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 FAM8A1Q9UBU6 413 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 FIS1Q9Y3D6 152 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 TMEM233B4DJY2 109 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 UBFD1O14562 309 aaKnown RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 PLRG1O43660 514 aaKnown RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 RPS17P08708 135 aaKnown RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 RPS21P63220 83 aaKnown RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 SGCGQ13326 291 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 PDCD2Q16342 344 aaPredicted RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 PHKG1Q16816 387 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 WSCD2Q2TBF2 565 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 SLC9B1Q4ZJI4 515 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 ADAMTSL4Q6UY14 1074 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 VRK3Q8IV63 474 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 PPP1R36Q96LQ0 422 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 LENG8Q96PV6 779 aaPredicted RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 C1QTNF3Q9BXJ4 246 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 NUF2Q9BZD4 464 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 NMUR2Q9GZQ4 415 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 CD248Q9HCU0 757 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 NDRG2Q9UN36 371 aaKnown RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 SLC12A4Q9UP95 1085 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 ZFR2Q9UPR6 939 aaKnown RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 NCKAP1Q9Y2A7 1128 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 TRAF6Q9Y4K3 522 aa18.63■□□□□ 0.57
SMC4-209ENST00000468653 TNPO3Q9Y5L0 923 aaKnown RBP18.63■□□□□ 0.57
SMC4-209ENST00000468653 UNC80Q8N2C7 3258 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 TRPC5OSA6NMA1 111 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 VEGFDO43915 354 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 C8GP07360 202 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 ACADMP11310 421 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 PBLDP30039 288 aaPredicted RBP18.62■□□□□ 0.57
SMC4-209ENST00000468653 SCTRP47872 440 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 TUBB3Q13509 450 aa18.62■□□□□ 0.57
SMC4-209ENST00000468653 CCINQ13939 588 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms