RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 CASS4Q9NQ75 786 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 SLC39A1Q9NY26 324 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 SMARCAL1Q9NZC9 954 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 PDP2Q9P2J9 529 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 URB1O60287 2271 aaKnown RBP11.3□□□□□ -0.6
CDHR3-205ENST00000468143 CACNA1GO43497 2377 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 TRBV5-4A0A0C4DH59 114 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 HEATR9A2RTY3 570 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 CCDC162PA2VCL2 907 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 H7C0S8 307 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 CAPN5O15484 640 aaPredicted RBP11.3□□□□□ -0.6
CDHR3-205ENST00000468143 KIF1CO43896 1103 aaKnown RBP11.3□□□□□ -0.6
CDHR3-205ENST00000468143 ADRA1DP25100 572 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 MSNP26038 577 aaKnown RBP11.3□□□□□ -0.6
CDHR3-205ENST00000468143 SEPHS1P49903 392 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 TMPRSS3P57727 454 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 SESN2P58004 480 aaPredicted RBP11.3□□□□□ -0.6
CDHR3-205ENST00000468143 DBN1Q16643 649 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 SKIDA1Q1XH10 827 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 TSTD2Q5T7W7 516 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 TMEM164Q5U3C3 297 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 ANKS6Q68DC2 871 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 DRICH1Q6PGQ1 229 aaPredicted RBP11.3□□□□□ -0.6
CDHR3-205ENST00000468143 GPR155Q7Z3F1 870 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 PLXDC1Q8IUK5 500 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 SLC35F6Q8N357 371 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 PRELID2Q8N945 189 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 HEXDCQ8WVB3 486 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 HDAC10Q969S8 669 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 C12orf66Q96MD2 445 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 C19orf43Q9BQ61 176 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 AP1M1Q9BXS5 423 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 UCK1Q9HA47 277 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 JRKLQ9Y4A0 524 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 B3GALT1Q9Y5Z6 326 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 PRSS21Q9Y6M0 314 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 ARHGEF17Q96PE2 2063 aaPredicted RBP11.3□□□□□ -0.6
CDHR3-205ENST00000468143 ZFHX4Q86UP3 3567 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 APC2O95996 2303 aa11.3□□□□□ -0.6
CDHR3-205ENST00000468143 EFSO43281 561 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 RASSF9O75901 435 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 GOT2P00505 430 aaKnown RBP11.29□□□□□ -0.6
CDHR3-205ENST00000468143 SLC35G4P0C7Q5 338 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 LIPCP11150 499 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 MTHFD1P11586 935 aaKnown RBP11.29□□□□□ -0.6
CDHR3-205ENST00000468143 PRLHRP49683 370 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 VPS41P49754 854 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 PPP1CAP62136 330 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 CRADDP78560 199 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 KRT33BQ14525 404 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 PLCL1Q15111 1095 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 SOWAHCQ53LP3 525 aaPredicted RBP11.29□□□□□ -0.6
CDHR3-205ENST00000468143 IRGCQ6NXR0 463 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 TTC27Q6P3X3 843 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 NAPRTQ6XQN6 538 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 CCDC81Q6ZN84 652 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 FAM92BQ6ZTR7 304 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 VASH2Q86V25 355 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 RBM12BQ8IXT5 1001 aaKnown RBP11.29□□□□□ -0.6
CDHR3-205ENST00000468143 PHC3Q8NDX5 983 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 OR13J1Q8NGT2 312 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 OR6P1Q8NGX9 317 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 LINC00615Q96LM1 132 aaPredicted RBP11.29□□□□□ -0.6
CDHR3-205ENST00000468143 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
CDHR3-205ENST00000468143 CCM2Q9BSQ5 444 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 EPB41L1Q9H4G0 881 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 APMAPQ9HDC9 416 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 CHRAC1Q9NRG0 131 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 ACSL5Q9ULC5 683 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
CDHR3-205ENST00000468143 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
CDHR3-205ENST00000468143 FREM2Q5SZK8 3169 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 IGLV3-16A0A075B6K0 115 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 TCRBV7S3A2A0A539 114 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 ZSCAN12O43309 604 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 OR1I1O60431 355 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 C9P02748 559 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 PSMA3P25788 255 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 PDHA2P29803 388 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 FOXN2P32314 431 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 PREPP48147 710 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 MC2RQ01718 297 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 FOXM1Q08050 763 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 VAC14Q08AM6 782 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 SEMA3AQ14563 771 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 BRD3Q15059 726 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 KIF26BQ2KJY2 2108 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 DCAF12Q5T6F0 453 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 CACHD1Q5VU97 1274 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 LDB1Q86U70 411 aaPredicted RBP11.28□□□□□ -0.6
CDHR3-205ENST00000468143 RASGEF1CQ8N431 466 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 BMPERQ8N8U9 685 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 PPHLN1Q8NEY8 458 aaKnown RBP11.28□□□□□ -0.6
CDHR3-205ENST00000468143 HM13Q8TCT9 377 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 COG1Q8WTW3 980 aa11.28□□□□□ -0.6
CDHR3-205ENST00000468143 MAGOHBQ96A72 148 aaKnown RBP11.28□□□□□ -0.6
CDHR3-205ENST00000468143 PBKQ96KB5 322 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms