RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 IFT80Q9P2H3 777 aaPredicted RBP11.32□□□□□ -0.6
VPS26A-204ENST00000467852 ZNF749O43361 778 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 NUAK1O60285 661 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 PALMO75781 387 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 MTA2O94776 668 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 TOXO94900 526 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 ZRANB2O95218 330 aaKnown RBP eCLIP11.31□□□□□ -0.6
VPS26A-204ENST00000467852 CPP00450 1065 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 UMODP07911 640 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 LHCGRP22888 699 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 MMP11P24347 488 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 SCNN1BP51168 640 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 GCNT1Q02742 428 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 NSUN2Q08J23 767 aaKnown RBP eCLIP11.31□□□□□ -0.6
VPS26A-204ENST00000467852 STK38Q15208 465 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 INSCQ1MX18 579 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 FAM173BQ6P4H8 233 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 CDC20BQ86Y33 519 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 CARFQ8N187 725 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 LILRB4Q8NHJ6 448 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 USP28Q96RU2 1077 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 AGAP2Q99490 1192 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 CINPQ9BW66 212 aaPredicted RBP11.31□□□□□ -0.6
VPS26A-204ENST00000467852 GTPBP4Q9BZE4 634 aaKnown RBP11.31□□□□□ -0.6
VPS26A-204ENST00000467852 UCK2Q9BZX2 261 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 CARD9Q9H257 536 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 RASSF1Q9NS23 344 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 CNTN6Q9UQ52 1028 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 MRPS2Q9Y399 296 aaKnown RBP11.31□□□□□ -0.6
VPS26A-204ENST00000467852 PKD1L1Q8TDX9 2849 aa11.31□□□□□ -0.6
VPS26A-204ENST00000467852 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.3□□□□□ -0.6
VPS26A-204ENST00000467852 NPIPB15A6NHN6 443 aaPredicted RBP11.3□□□□□ -0.6
VPS26A-204ENST00000467852 OR52A4PA6NMU1 304 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 WASH4PA8MWX3 477 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 FAM72CH0Y354 149 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 H7C1Q1 480 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 PRRG2O14669 202 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 SMAD7O15105 426 aaKnown RBP11.3□□□□□ -0.6
VPS26A-204ENST00000467852 DDX3YO15523 660 aaKnown RBP11.3□□□□□ -0.6
VPS26A-204ENST00000467852 ARHGEF9O43307 516 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 WISP2O76076 250 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 ATE1O95260 518 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 TSPAN12O95859 305 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 CBSLP0DN79 551 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 BRAFP15056 766 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 ZNF30P17039 623 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 TNFAIP3P21580 790 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 RPL10P27635 214 aaKnown RBP11.3□□□□□ -0.6
VPS26A-204ENST00000467852 CBSP35520 551 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 AP1S1P61966 158 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 DCDP81605 110 aaKnown RBP11.3□□□□□ -0.6
VPS26A-204ENST00000467852 CACNG1Q06432 222 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 CETN1Q12798 172 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 SYCP1Q15431 976 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 TUBB8Q3ZCM7 444 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 ZNF789Q5FWF6 425 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 FAM72AQ5TYM5 149 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 FAM72DQ6L9T8 149 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 ARMC6Q6NXE6 501 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 SHC4Q6S5L8 630 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 ABRAXAS1Q6UWZ7 409 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 NAPRTQ6XQN6 538 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 RFLNAQ6ZTI6 216 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 TSPAN33Q86UF1 283 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 FAM72BQ86X60 149 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 DOLPP1Q86YN1 238 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 PASD1Q8IV76 773 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 RTL3Q8N8U3 475 aaKnown RBP11.3□□□□□ -0.6
VPS26A-204ENST00000467852 MYRIPQ8NFW9 859 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 GPR137Q96N19 417 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 RIOK2Q9BVS4 552 aaKnown RBP11.3□□□□□ -0.6
VPS26A-204ENST00000467852 HRASLS2Q9NWW9 162 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 TRPS1Q9UHF7 1281 aa11.3□□□□□ -0.6
VPS26A-204ENST00000467852 HRNRQ86YZ3 2850 aaPredicted RBP11.29□□□□□ -0.6
VPS26A-204ENST00000467852 OR5K3A6NET4 321 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 FAM227AF5H4B4 570 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 J3KR12 359 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 CHRNB4P30926 498 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 PREPP48147 710 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 TDRD12Q587J7 1177 aaKnown RBP11.29□□□□□ -0.6
VPS26A-204ENST00000467852 ZFYVE27Q5T4F4 411 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 C3P1Q6ZMU1 363 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 CEP128Q6ZU80 1094 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 ZZZ3Q8IYH5 903 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 GPR135Q8IZ08 494 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
VPS26A-204ENST00000467852 CCDC47Q96A33 483 aaKnown RBP11.29□□□□□ -0.6
VPS26A-204ENST00000467852 SCRN2Q96FV2 425 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 BDH2Q9BUT1 245 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 AP1M1Q9BXS5 423 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 PDFQ9HBH1 243 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
VPS26A-204ENST00000467852 PRAMEF11O60813 436 aa11.28□□□□□ -0.6
VPS26A-204ENST00000467852 FMO5P49326 533 aa11.28□□□□□ -0.6
VPS26A-204ENST00000467852 FOXL2P58012 376 aa11.28□□□□□ -0.6
VPS26A-204ENST00000467852 C1orf189Q5VU69 101 aa11.28□□□□□ -0.6
VPS26A-204ENST00000467852 TMEM211Q6ICI0 200 aa11.28□□□□□ -0.6
VPS26A-204ENST00000467852 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
VPS26A-204ENST00000467852 WASH2PQ6VEQ5 465 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms