RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 UBXN4Q92575 508 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 MAP3K3Q99759 626 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 C10orf88Q9H8K7 445 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 PDE7BQ9NP56 450 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 FAM8A1Q9UBU6 413 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 RARRES3Q9UL19 164 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 PADI1Q9ULC6 663 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 POLHQ9Y253 713 aa20.61■□□□□ 0.89
COL9A3-207ENST00000467819 STX7O15400 261 aaKnown RBP20.6■□□□□ 0.89
COL9A3-207ENST00000467819 ZRANB2O95218 330 aaKnown RBP eCLIP20.6■□□□□ 0.89
COL9A3-207ENST00000467819 AGTP01019 485 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 EBLN1P0CF75 366 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 MTHFD1P11586 935 aaKnown RBP20.6■□□□□ 0.89
COL9A3-207ENST00000467819 FOLR1P15328 257 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 MSH3P20585 1137 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 MAGEA1P43355 309 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 FOXK1P85037 733 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 PWWP2BQ6NUJ5 590 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 DUS1LQ6P1R4 473 aaKnown RBP20.6■□□□□ 0.89
COL9A3-207ENST00000467819 KLHL35Q6PF15 583 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 CERS6Q6ZMG9 384 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 SLC41A2Q96JW4 573 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 FICDQ9BVA6 458 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 HEMGNQ9BXL5 484 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 TWSG1Q9GZX9 223 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 WWP1Q9H0M0 922 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 TRHDEQ9UKU6 1024 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 TFR2Q9UP52 801 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 ARL5AQ9Y689 179 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 DNMT3AQ9Y6K1 912 aaPredicted RBP20.6■□□□□ 0.89
COL9A3-207ENST00000467819 SPTBP11277 2137 aa20.6■□□□□ 0.89
COL9A3-207ENST00000467819 PIPSLA2A3N6 862 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 HACD1B0YJ81 288 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 MKRN2OSH3BPM6 223 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 H7C0C1 242 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 PRAMEF1O95521 474 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 MT-ND3P03897 115 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 ATP5OP48047 213 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 ARL4DP49703 201 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 HADHBP55084 474 aaKnown RBP20.59■□□□□ 0.89
COL9A3-207ENST00000467819 LONRF2Q1L5Z9 754 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 DNTTIP2Q5QJE6 756 aaKnown RBP20.59■□□□□ 0.89
COL9A3-207ENST00000467819 RCOR2Q8IZ40 523 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 ZNF398Q8TD17 642 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 RBM41Q96IZ5 413 aaKnown RBP20.59■□□□□ 0.89
COL9A3-207ENST00000467819 C12orf66Q96MD2 445 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 TSPY26PQ9H489 355 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 LHX9Q9NQ69 397 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 SMOXQ9NWM0 555 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 SEMA5BQ9P283 1151 aa20.59■□□□□ 0.89
COL9A3-207ENST00000467819 UBA6A0AVT1 1052 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-207ENST00000467819 K7EM74 188 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 CREG1O75629 220 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 RBL1P28749 1068 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 GEMP55040 296 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 METRNLQ641Q3 311 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 OR4K2Q8NGD2 314 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 KRT35Q92764 455 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 ZNF514Q96K75 400 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-207ENST00000467819 RUFY1Q96T51 708 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 INSM2Q96T92 566 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-207ENST00000467819 APOL2Q9BQE5 337 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 GBA3Q9H227 469 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 FGF21Q9NSA1 209 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 MAN2B2Q9Y2E5 1009 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 PCDHGA6Q9Y5G7 932 aa20.58■□□□□ 0.89
COL9A3-207ENST00000467819 PIKFYVEQ9Y2I7 2098 aa20.58■□□□□ 0.88
COL9A3-207ENST00000467819 MACROD2A1Z1Q3 448 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 OR5K3A6NET4 321 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 TLCD2A6NGC4 264 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 RFPL1O75677 317 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 NTRK1P04629 796 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 LPOP22079 712 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-207ENST00000467819 ACY1Q03154 408 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 KLRB1Q12918 225 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 TBX2Q13207 712 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-207ENST00000467819 OLIG2Q13516 323 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 CCDC181Q5TID7 509 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 FAM199XQ6PEV8 388 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-207ENST00000467819 BBS12Q6ZW61 710 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 OOSP2Q86WS3 158 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 SPDYE1Q8NFV5 336 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-207ENST00000467819 CD180Q99467 661 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 GORASP1Q9BQQ3 440 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 ACTL8Q9H568 366 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 ASB8Q9H765 288 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 AKIRIN1Q9H9L7 192 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-207ENST00000467819 HRASLS2Q9NWW9 162 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 FKBPLQ9UIM3 349 aa20.57■□□□□ 0.88
COL9A3-207ENST00000467819 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.57■□□□□ 0.88
COL9A3-207ENST00000467819 MED13Q9UHV7 2174 aa20.56■□□□□ 0.88
COL9A3-207ENST00000467819 MGAT4DA6NG13 374 aa20.56■□□□□ 0.88
COL9A3-207ENST00000467819 C2orf81A6NN90 581 aa20.56■□□□□ 0.88
COL9A3-207ENST00000467819 C21orf140B9A014 251 aa20.56■□□□□ 0.88
COL9A3-207ENST00000467819 APOC4-APOC2K7ER74 178 aa20.56■□□□□ 0.88
COL9A3-207ENST00000467819 ANXA9O76027 345 aa20.56■□□□□ 0.88
COL9A3-207ENST00000467819 APOC2P02655 101 aa20.56■□□□□ 0.88
COL9A3-207ENST00000467819 SLC35G4P0C7Q5 338 aa20.56■□□□□ 0.88
COL9A3-207ENST00000467819 ARCN1P48444 511 aaKnown RBP20.56■□□□□ 0.88
COL9A3-207ENST00000467819 RPS18P62269 152 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms