RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ELMO2Q96JJ3 720 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TSC22D3Q99576 134 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 OLFM1Q99784 485 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 AARSD1Q9BTE6 412 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 ZCCHC2Q9C0B9 1178 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 YIPF3Q9GZM5 350 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 AASDHPPTQ9NRN7 309 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 LGALS13Q9UHV8 139 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 GNPTGQ9UJJ9 305 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 SLC39A10Q9ULF5 831 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 PCYT1BQ9Y5K3 369 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TMEM131Q92545 1883 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 E5RI56 91 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 GALR2O43603 387 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 KRT15P19012 456 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 RABIFP47224 123 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 DHPSP49366 369 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 CDKN2DP55273 166 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 RACK1P63244 317 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF460Q14592 562 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 LGSNQ5TDP6 509 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 PTRHD1Q6GMV3 140 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 FAM45BPQ6NSW5 357 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 PIM3Q86V86 326 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 C11orf74Q86VG3 221 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TRAPPC5Q8IUR0 188 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 CEP97Q8IW35 865 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 C1orf216Q8TAB5 229 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 FAM45AQ8TCE6 357 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 LKAAEAR1Q8TD35 194 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 HEXDCQ8WVB3 486 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TM9SF3Q9HD45 589 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 MRPL40Q9NQ50 206 aaKnown RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 TUBA8Q9NY65 449 aaPredicted RBP6.76□□□□□ -1.33
SCAF4-204ENST00000467731 PCDHB1Q9Y5F3 818 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 RALGAPA1Q6GYQ0 2036 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 MUC6Q6W4X9 2439 aa6.76□□□□□ -1.33
SCAF4-204ENST00000467731 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 TPP1O14773 563 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 VEGFDO43915 354 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 NUAK1O60285 661 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 DNAJC6O75061 913 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 RASSF9O75901 435 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 TRIM16O95361 564 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 FUCA1P04066 466 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 CEACAM5P06731 702 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 OR56A5P0C7T3 313 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 THEGLP0DJG4 465 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 ITGB6P18564 788 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 CHRM3P20309 590 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 HTR1BP28222 390 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 CD38P28907 300 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 CNR2P34972 360 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 PRLHRP49683 370 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 PSMD7P51665 324 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 THOP1P52888 689 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 TAS2R39P59534 338 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 KIAA1024LP59773 190 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 YPEL5P62699 121 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 TIAL1Q01085 375 aaKnown RBP eCLIP6.75□□□□□ -1.332e-6■■■■□ 22
SCAF4-204ENST00000467731 ACTN3Q08043 901 aaPredicted RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 USP10Q14694 798 aaKnown RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 NFATC4Q14934 902 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 SMUG1Q53HV7 270 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 WDR45BQ5MNZ6 344 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 LYSMD4Q5XG99 296 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 TMEM220Q6QAJ8 160 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 ENPP7Q6UWV6 458 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 MACC1Q6ZN28 852 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 CEP68Q76N32 757 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 CROCCP2Q86T23 111 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 SPATS2Q86XZ4 545 aaKnown RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 ZNF547Q8IVP9 402 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 KCNJ9Q92806 393 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 ARL8AQ96BM9 186 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 MTBPQ96DY7 904 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 PGM2Q96G03 612 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 SH3GL1Q99961 368 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 SH3GL2Q99962 352 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 TMBIM4Q9HC24 238 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 SARS2Q9NP81 518 aaKnown RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 QPCTLQ9NXS2 382 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 GALPQ9UBC7 116 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 MOSPD1Q9UJG1 213 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 PNMA8BQ9ULN7 279 aaPredicted RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 SLC17A4Q9Y2C5 497 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 VWA7Q9Y334 891 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 PRKAB1Q9Y478 270 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 PCDHGA2Q9Y5H1 932 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 GOLGA4Q13439 2230 aaKnown RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 ADAMTS9Q9P2N4 1935 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 A0A1W2PPM1 405 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 PHGDHO43175 533 aaKnown RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 LILRB5O75023 590 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 RFPL1O75677 317 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 RHOBTB1O94844 696 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 WNT1P04628 370 aa6.75□□□□□ -1.33
SCAF4-204ENST00000467731 HOXC4P09017 264 aaPredicted RBP6.75□□□□□ -1.33
SCAF4-204ENST00000467731 STMN1P16949 149 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms