RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MAOAP21397 527 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 HOXC8P31273 242 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 GABRB2P47870 512 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 RAD23BP54727 409 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 BAK1Q16611 211 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 C2orf68Q2NKX9 166 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 PRICKLE4Q2TBC4 344 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 EIF2S3LQ2VIR3 472 aaKnown RBP3.38□□□□□ -1.87
XRN1-206ENST00000467077 SLC9B1Q4ZJI4 515 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 TAOK1Q7L7X3 1001 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 HUS1BQ8NHY5 278 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 HTRA1Q92743 480 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 ABTB1Q969K4 478 aaPredicted RBP3.38□□□□□ -1.87
XRN1-206ENST00000467077 HVCN1Q96D96 273 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 KIF1BPQ96EK5 621 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 KLHL15Q96M94 604 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 GLIS2Q9BZE0 524 aaPredicted RBP3.38□□□□□ -1.87
XRN1-206ENST00000467077 TKTL2Q9H0I9 626 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 KCNN2Q9H2S1 579 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 PLEKHA4Q9H4M7 779 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 BARHL2Q9NY43 387 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 MPP6Q9NZW5 540 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 FBXO9Q9UK97 447 aaPredicted RBP3.38□□□□□ -1.87
XRN1-206ENST00000467077 SCINQ9Y6U3 715 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 SBF1O95248 1867 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 C4BP0C0L5 1744 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 TOGARAM1Q9Y4F4 1720 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 NFAT5O94916 1531 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 IGSF1Q8N6C5 1336 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 TNRC18O15417 2968 aaPredicted RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 KIAA1551Q9HCM1 1747 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 CCDC196A0A1B0GTZ2 297 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 NPHP1O15259 732 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 SEC14L5O43304 696 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 PRKNO60260 465 aaPredicted RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 DDX5P17844 614 aaKnown RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 S1PR1P21453 382 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 MAPK9P45984 424 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 CCR10P46092 362 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 METAP2P50579 478 aaKnown RBP eCLIP3.37□□□□□ -1.87
XRN1-206ENST00000467077 EEF1A1P68104 462 aaKnown RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 RUNX1T1Q06455 604 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 FOXD4Q12950 439 aaPredicted RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 TBX2Q13207 712 aaPredicted RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 SLC45A4Q5BKX6 768 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 EEF1A1P5Q5VTE0 462 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 HIST2H2BDQ6DRA6 164 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 SLC36A4Q6YBV0 504 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 TRPT1Q86TN4 253 aaKnown RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 CHERPQ8IWX8 916 aaKnown RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 C1orf87Q8N0U7 546 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 DDHD1Q8NEL9 900 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 TRIM58Q8NG06 486 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 KLHL29Q96CT2 875 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 PABPC5Q96DU9 382 aaKnown RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 H2AFJQ9BTM1 129 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 GPR108Q9NPR9 543 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 C2orf42Q9NWW7 574 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 KCND2Q9NZV8 630 aa3.37□□□□□ -1.87
XRN1-206ENST00000467077 CICQ96RK0 1608 aaPredicted RBP3.37□□□□□ -1.87
XRN1-206ENST00000467077 TIAM2Q8IVF5 1701 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 A0A1W2PQM1 296 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 GOLGA6L9A6NEM1 432 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 CLIC2O15247 247 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 IGHV4-39P01824 125 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 HOXB5P09067 269 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 GATA2P23769 480 aaPredicted RBP3.36□□□□□ -1.87
XRN1-206ENST00000467077 DDIT3P35638 169 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 GNAQP50148 359 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 SORDQ00796 357 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 KRT24Q2M2I5 525 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 SLC9C2Q5TAH2 1124 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 QSOX2Q6ZRP7 698 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 SLC46A3Q7Z3Q1 461 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 SPATA6LQ8N4H0 392 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 BMPERQ8N8U9 685 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 DUSP19Q8WTR2 217 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 EVI5LQ96CN4 794 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 RNF125Q96EQ8 232 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 SH3GL2Q99962 352 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 FAM110AQ9BQ89 295 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 NDST4Q9H3R1 872 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 PPP1R3EQ9H7J1 279 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 VEZTQ9HBM0 779 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 MMP25Q9NPA2 562 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 HINT3Q9NQE9 182 aaKnown RBP3.36□□□□□ -1.87
XRN1-206ENST00000467077 SARDHQ9UL12 918 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 LRRFIP2Q9Y608 721 aaKnown RBP3.36□□□□□ -1.87
XRN1-206ENST00000467077 ANKRD36BQ8N2N9 1353 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 USP47Q96K76 1375 aa3.36□□□□□ -1.87
XRN1-206ENST00000467077 KCPQ6ZWJ8 1503 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 IGKV6D-21A0A0A0MT36 114 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 USP17L23D6RBM5 183 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 FTCDO95954 541 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 F9P00740 461 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 PYGLP06737 847 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 HSPA1AP0DMV8 641 aaKnown RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 HSPA1BP0DMV9 641 aaKnown RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 RRM1P23921 792 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms