RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TRIM32Q13049 653 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 MS4A13Q5J8X5 152 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 C1QTNF12Q5T7M4 302 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 GPRIN3Q6ZVF9 776 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ANKRD13BQ86YJ7 626 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 BRSK1Q8TDC3 778 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 IGSF8Q969P0 613 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF641Q96N77 438 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 HBEGFQ99075 208 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 HEBP1Q9NRV9 189 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 EXD2Q9NVH0 621 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 DNAJB9Q9UBS3 223 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF232Q9UNY5 417 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 NAALAD2Q9Y3Q0 740 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 SYCE1LA8MT33 242 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 E2F3O00716 465 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ANKRD28O15084 1053 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 AQP9O43315 295 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 TBC1D4O60343 1298 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 DFNA5O60443 496 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 B3GAT3O94766 335 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 TSPAN12O95859 305 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 FGF1P05230 155 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ITIH1P19827 911 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 HOXD12P35452 270 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ISL1P61371 349 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ILF2Q12905 390 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ATP6AP1LQ52LC2 224 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 CADM3Q8N126 398 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 OR56A4Q8NGH8 313 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ZFP90Q8TF47 636 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 FIG4Q92562 907 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 CCDC138Q96M89 665 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 SERPINB11Q96P15 392 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 GIN1Q9NXP7 522 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 VAPAQ9P0L0 249 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 SLC1A7O00341 560 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 SOAT2O75908 522 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 CST1P01037 141 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 CYP11A1P05108 521 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 HLA-DPA1P20036 260 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 RPL9P32969 192 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 GRIK1P39086 918 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 CDKN1CP49918 316 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 BEX3Q00994 111 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 OCA2Q04671 838 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 PWP1Q13610 501 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 LETMD1Q6P1Q0 360 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 PRR23BQ6ZRT6 265 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 TMEM179BQ7Z7N9 219 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 CIR1Q86X95 450 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 METTL23Q86XA0 190 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF555Q8NEP9 628 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 IKZF5Q9H5V7 419 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ATAD3AQ9NVI7 634 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 TMEM45AQ9NWC5 275 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 USE1Q9NZ43 259 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 KIAA1522Q9P206 1035 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 MTRRQ9UBK8 725 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 ST3GAL5Q9UNP4 418 aa12.82□□□□□ -0.36
PDZRN3-205ENST00000466780 PTGES3LE9PB15 166 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 PRKACGP22612 351 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 TMED10P49755 219 aaKnown RBP12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 KPNA1P52294 538 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 TXNDC11Q6PKC3 985 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 CYP20A1Q6UW02 462 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 NECAB2Q7Z6G3 386 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 FAM126BQ8IXS8 530 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 ABI1Q8IZP0 508 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 TTC30BQ8N4P2 665 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 SDCCAG3Q96C92 435 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 CCDC115Q96NT0 180 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 NODALQ96S42 347 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 GORASP2Q9H8Y8 452 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 MAGEE1Q9HCI5 957 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 HMG20AQ9NP66 347 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 TLR6Q9Y2C9 796 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 FAM32AQ9Y421 112 aaKnown RBP12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 SPO11Q9Y5K1 396 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 MYO16Q9Y6X6 1858 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 MAN1A2O60476 641 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 CNOT3O75175 753 aaKnown RBP12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 NDUFS2O75306 463 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 FSHRP23945 695 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 ACVRL1P37023 503 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 SDHAF4Q5VUM1 108 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 SPESP1Q6UW49 350 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 SLCO6A1Q86UG4 719 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF548Q8NEK5 533 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 FRS2Q8WU20 508 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 C17orf80Q9BSJ5 609 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 UGT2B28Q9BY64 529 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 ATP13A3Q9H7F0 1226 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 FBXO10Q9UK96 956 aa12.81□□□□□ -0.36
PDZRN3-205ENST00000466780 C17orf102A2RUQ5 167 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 F8W810 466 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 POMCP01189 267 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 OR4Q2P0C623 313 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms