RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 A0A087WWL8 130 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 TCRBV7S2A1N4TA0A589 114 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 URADA6NGE7 173 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 NPIPB15A6NHN6 443 aaPredicted RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 LIPT2A6NK58 231 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 GRXCR1A8MXD5 290 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 A8MXQ7 604 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 TMEM189-UBE2V1I3L0A0 370 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 NDUFS8O00217 210 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 SYN3O14994 580 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 CASC3O15234 703 aaKnown RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 MED7O43513 233 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 SLC43A1O75387 559 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 SPAG6O75602 509 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 RECQL5O94762 991 aaPredicted RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 ASS1P00966 412 aaKnown RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 CA3P07451 260 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 CDH2P19022 906 aaPredicted RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 CD58P19256 250 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 PON1P27169 355 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 ARL1P40616 181 aaPredicted RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 CASRP41180 1078 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 SLC11A2P49281 568 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 BMXP51813 675 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 ZNF75DP51815 510 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 TRA2BP62995 288 aaKnown RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 GCNT1Q02742 428 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 DSC1Q08554 894 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 TBL3Q12788 808 aaKnown RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 PTP4A2Q12974 167 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 GPM6BQ13491 265 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 TUBB2AQ13885 445 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 DOC2AQ14183 400 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 AARDQ4LEZ3 155 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 LRRC23Q53EV4 343 aaPredicted RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 MIIPQ5JXC2 388 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 DCAF12L1Q5VU92 463 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 FUT10Q6P4F1 479 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 TRIM65Q6PJ69 517 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 SUSD1Q6UWL2 747 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 SCARA5Q6ZMJ2 495 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 RRAGAQ7L523 313 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 VPS36Q86VN1 386 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 IGDCC3Q8IVU1 814 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 SIX6OS1Q8N1H7 587 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 GBP7Q8N8V2 638 aaPredicted RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 MIPOL1Q8TD10 442 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 ACMSDQ8TDX5 336 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 ARNTL2Q8WYA1 636 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 IGSF21Q96ID5 467 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 ARL5BQ96KC2 179 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 HS6ST2Q96MM7 605 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 BCL7BQ9BQE9 202 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 NAA11Q9BSU3 229 aaPredicted RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 TUBB2BQ9BVA1 445 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 HEMGNQ9BXL5 484 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 SLC25A18Q9H1K4 315 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 CWH43Q9H720 699 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 C8orf33Q9H7E9 229 aaPredicted RBP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 ENTPD7Q9NQZ7 604 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.31□□□□□ -1.4
SFPQ-203ENST00000466213 LPAR3Q9UBY5 353 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 CA14Q9ULX7 337 aa6.31□□□□□ -1.4
SFPQ-203ENST00000466213 PTPRJQ12913 1337 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 EME2A4GXA9 379 aaPredicted RBP6.3□□□□□ -1.4
SFPQ-203ENST00000466213 LINC01553A4QN01 128 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 MBD3L4A6NDZ8 208 aaPredicted RBP6.3□□□□□ -1.4
SFPQ-203ENST00000466213 MBD3L3A6NE82 208 aaPredicted RBP6.3□□□□□ -1.4
SFPQ-203ENST00000466213 SLC9B1P1A6NJY1 282 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 ACOD1A6NK06 481 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 OR6C75A6NL08 312 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 MYO1GB0I1T2 1018 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 PRPF4O43172 522 aaKnown RBP eCLIP6.3□□□□□ -1.4
SFPQ-203ENST00000466213 TEX33O43247 280 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 TACC1O75410 805 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 IPO13O94829 963 aaKnown RBP6.3□□□□□ -1.4
SFPQ-203ENST00000466213 TOX4O94842 621 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 UNC5CO95185 931 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 VNN1O95497 513 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 CXCL14O95715 111 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 TUBBP07437 444 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 WEE2P0C1S8 567 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 CD19P15391 556 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 GYPEP15421 78 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 EGR1P18146 543 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 GGT5P36269 586 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 BRCC3P46736 316 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 DHPSP49366 369 aaPredicted RBP6.3□□□□□ -1.4
SFPQ-203ENST00000466213 GLUD2P49448 558 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 BCAT1P54687 386 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 UCP3P55916 312 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 ARPP19P56211 112 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 STX1BP61266 288 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 TUBB4BP68371 445 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 DUSP2Q05923 314 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 GPS1Q13098 491 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 DUSP8Q13202 625 aa6.3□□□□□ -1.4
SFPQ-203ENST00000466213 TRA2AQ13595 282 aaKnown RBP eCLIP6.3□□□□□ -1.4
SFPQ-203ENST00000466213 SQLEQ14534 574 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms