RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 TMED2Q15363 201 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 SHBQ15464 509 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 PLA2G4EQ3MJ16 856 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 KRT71Q3SY84 523 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 ZNF542PQ5EBM4 170 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 CEP85LQ5SZL2 805 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 TMEM207Q6UWW9 146 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 TIFABQ6ZNK6 161 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 FAM83HQ6ZRV2 1179 aaPredicted RBP10.95□□□□□ -0.66
VCP-204ENST00000466100 TAOK1Q7L7X3 1001 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 CMC1Q7Z7K0 106 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 NRROSQ86YC3 692 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 HID1Q8IV36 788 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 LILRA3Q8N6C8 439 aaPredicted RBP10.95□□□□□ -0.66
VCP-204ENST00000466100 OR2L2Q8NH16 312 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 HM13Q8TCT9 377 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 SKA1Q96BD8 255 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 FAM136AQ96C01 138 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 MTBPQ96DY7 904 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 PANX3Q96QZ0 392 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 LRRC61Q9BV99 259 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 TMEM168Q9H0V1 697 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 IRF2BPLQ9H1B7 796 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 CCDC68Q9H2F9 335 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 ARRDC1-AS1Q9H2J1 176 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 COG4Q9H9E3 785 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 POPDC3Q9HBV1 291 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 FSCN3Q9NQT6 498 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 SNX15Q9NRS6 342 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 SPATS2LQ9NUQ6 558 aaKnown RBP10.95□□□□□ -0.66
VCP-204ENST00000466100 FAM86C1Q9NVL1 165 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 ZNHIT2Q9UHR6 403 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 RAB23Q9ULC3 237 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 SLC39A10Q9ULF5 831 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 DHRS7Q9Y394 339 aa10.95□□□□□ -0.66
VCP-204ENST00000466100 CFAP54Q96N23 3096 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 IQANK1A0A1B0GTG1 560 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 TLDC2A0PJX2 215 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 KLHL33A6NCF5 533 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 A6NCN8 305 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 FOXO6A8MYZ6 492 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 F8W8V4 182 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 TPP1O14773 563 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 SCAMP1O15126 338 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 VPS26AO75436 327 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 RFPL1O75677 317 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 TRIM16O95361 564 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 TSPAN12O95859 305 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 TNFP01375 233 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 CFIP05156 583 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 RETP07949 1114 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 CELA2BP08218 269 aaPredicted RBP10.94□□□□□ -0.66
VCP-204ENST00000466100 SLC35E2BP0CK96 405 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 ACP5P13686 325 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 JUNDP17535 347 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 RXRGP48443 463 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 SERPINB8P50452 374 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 RAB10P61026 200 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 CTBSQ01459 385 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 DNAJC3Q13217 504 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 LRP8Q14114 963 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 NFE2L1Q14494 772 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 ZNF460Q14592 562 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 USP10Q14694 798 aaKnown RBP10.94□□□□□ -0.66
VCP-204ENST00000466100 TRIM61Q5EBN2 209 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 PAQR3Q6TCH7 311 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 NAPRTQ6XQN6 538 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 SH2D5Q6ZV89 423 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 CHST15Q7LFX5 561 aaPredicted RBP10.94□□□□□ -0.66
VCP-204ENST00000466100 KANSL1Q7Z3B3 1105 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 AMZ2Q86W34 360 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 CNPY4Q8N129 248 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 SIDT2Q8NBJ9 832 aaKnown RBP10.94□□□□□ -0.66
VCP-204ENST00000466100 CCL4L1Q8NHW4 92 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 GPBAR1Q8TDU6 330 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 ATOH1Q92858 354 aaPredicted RBP10.94□□□□□ -0.66
VCP-204ENST00000466100 SH3GL2Q99962 352 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 SMOC1Q9H4F8 434 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 DNAJC28Q9NX36 388 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 TAS2R13Q9NYV9 303 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 APOBEC3BQ9UH17 382 aaKnown RBP10.94□□□□□ -0.66
VCP-204ENST00000466100 TBK1Q9UHD2 729 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 MOSPD1Q9UJG1 213 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 SLC6A14Q9UN76 642 aa10.94□□□□□ -0.66
VCP-204ENST00000466100 E5RI56 91 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 LIN7AO14910 233 aaPredicted RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 PHGDHO43175 533 aaKnown RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 KCNJ13O60928 360 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 SLCO2B1O94956 709 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 STMN1P16949 149 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 ZNF37AP17032 561 aaPredicted RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 CHRM3P20309 590 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 AK4P27144 223 aaPredicted RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 PBLDP30039 288 aaPredicted RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 ATP5DP30049 168 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 GMPRP36959 345 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 CCNFP41002 786 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 SKIV2L2P42285 1042 aaKnown RBP10.93□□□□□ -0.66
VCP-204ENST00000466100 BLKP51451 505 aa10.93□□□□□ -0.66
VCP-204ENST00000466100 BOP1Q14137 746 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms