RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 TRIM10Q9UDY6 481 aa12.2□□□□□ -0.46
SOX2-OT-203ENST00000466034 ANAPC2Q9UJX6 822 aa12.2□□□□□ -0.46
SOX2-OT-203ENST00000466034 CROTQ9UKG9 612 aa12.2□□□□□ -0.46
SOX2-OT-203ENST00000466034 KCTD3Q9Y597 815 aa12.2□□□□□ -0.46
SOX2-OT-203ENST00000466034 PCDHGA6Q9Y5G7 932 aa12.2□□□□□ -0.46
SOX2-OT-203ENST00000466034 PCDHA13Q9Y5I0 950 aa12.2□□□□□ -0.46
SOX2-OT-203ENST00000466034 PTPN13Q12923 2485 aa12.2□□□□□ -0.46
SOX2-OT-203ENST00000466034 MGAT4DA6NG13 374 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 C2orf81A6NN90 581 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 AGAP14A8MT82 685 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 F5H423 210 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 H7C0C1 242 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 AGTP01019 485 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 PYGMP11217 842 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 MTHFD1P11586 935 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 MSH3P20585 1137 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 LPOP22079 712 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 RBL1P28749 1068 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 CYLC1P35663 651 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 DLSTP36957 453 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 ATP5OP48047 213 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 NFE2L1Q14494 772 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 TAF1AQ15573 450 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 DEFB109BQ30KR1 87 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 BCL7AQ4VC05 210 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 FAM92BQ6ZTR7 304 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 KLHDC8BQ8IXV7 354 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 CARFQ8N187 725 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 BEND7Q8N7W2 519 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 GALNT6Q8NCL4 622 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 OR2L2Q8NH16 312 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 ZNF398Q8TD17 642 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 STAMBPL1Q96FJ0 436 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 FERMT1Q9BQL6 677 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 FICDQ9BVA6 458 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 PDE7BQ9NP56 450 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 KCND3Q9UK17 655 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 ACSL5Q9ULC5 683 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 AAR2Q9Y312 384 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 PCDHB3Q9Y5E6 796 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 PCDHA3Q9Y5H8 950 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 MRPS18BQ9Y676 258 aaKnown RBP12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 ARL5AQ9Y689 179 aa12.19□□□□□ -0.46
SOX2-OT-203ENST00000466034 FLNCQ14315 2725 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 IGHV5-51A0A0C4DH38 117 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 OR5K3A6NET4 321 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 C5orf60A6NFR6 353 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 TLCD2A6NGC4 264 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 OR2AG2A6NM03 316 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 ARHGAP6O43182 974 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 BUD23O43709 281 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 ZNF189O75820 626 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 PRAMEF1O95521 474 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 CASRP41180 1078 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 PPP1CAP62136 330 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 XIAPP98170 497 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 PDE1BQ01064 536 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 OTUD4Q01804 1114 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 ACY1Q03154 408 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 TLE1Q04724 770 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 MSLNQ13421 630 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 SEPT6Q14141 434 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 SPA17Q15506 151 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 ATP1A1-AS1Q5TC04 95 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 DAAM2Q86T65 1068 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 PTRH1Q86Y79 214 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 CDKL3Q8IVW4 592 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 SIDT2Q8NBJ9 832 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 OR4K2Q8NGD2 314 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 ACTL9Q8TC94 416 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 PPP1R2P1Q96PQ5 205 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 INSM2Q96T92 566 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 HEMGNQ9BXL5 484 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 LNPEPQ9UIQ6 1025 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 RARRES3Q9UL19 164 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 PADI1Q9ULC6 663 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 PSMD13Q9UNM6 376 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 KCNMB2Q9Y691 235 aa12.18□□□□□ -0.46
SOX2-OT-203ENST00000466034 RELNP78509 3460 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 MAST4O15021 2626 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 NBASA2RRP1 2371 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 BTNL10A8MVZ5 291 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 C21orf140B9A014 251 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 PJA2O43164 708 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 SGTAO43765 313 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 SRP72O76094 671 aaKnown RBP12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 TIAF1O95411 115 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 CCNYL3P0C7X3 344 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 FOLR1P15328 257 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 CTNNA2P26232 953 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 AKT1P31749 480 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 TUBB3Q13509 450 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 DNASE1L3Q13609 305 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 PTPRCAPQ14761 206 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 PLCL1Q15111 1095 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 LACTB2Q53H82 288 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
SOX2-OT-203ENST00000466034 FNBP1LQ5T0N5 605 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms