RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 GRPEL1Q9HAV7 217 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 ETNK1Q9HBU6 452 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 NLE1Q9NVX2 485 aaPredicted RBP21.33■■□□□ 1.01
LIME1-203ENST00000465591 CFAP20Q9Y6A4 193 aaKnown RBP21.33■■□□□ 1.01
LIME1-203ENST00000465591 KALRNO60229 2985 aa21.32■■□□□ 1
LIME1-203ENST00000465591 TRBV5-4A0A0C4DH59 114 aa21.32■■□□□ 1
LIME1-203ENST00000465591 CAPN5O15484 640 aaPredicted RBP21.32■■□□□ 1
LIME1-203ENST00000465591 KIF1CO43896 1103 aaKnown RBP21.32■■□□□ 1
LIME1-203ENST00000465591 C1QL1O75973 258 aa21.32■■□□□ 1
LIME1-203ENST00000465591 IFNB1P01574 187 aa21.32■■□□□ 1
LIME1-203ENST00000465591 CCDC175P0C221 793 aa21.32■■□□□ 1
LIME1-203ENST00000465591 AMD1P17707 334 aa21.32■■□□□ 1
LIME1-203ENST00000465591 ITGALP20701 1170 aa21.32■■□□□ 1
LIME1-203ENST00000465591 STIP1P31948 543 aaKnown RBP21.32■■□□□ 1
LIME1-203ENST00000465591 GRIA1P42261 906 aa21.32■■□□□ 1
LIME1-203ENST00000465591 HALP42357 657 aa21.32■■□□□ 1
LIME1-203ENST00000465591 PPP1CAP62136 330 aa21.32■■□□□ 1
LIME1-203ENST00000465591 MC2RQ01718 297 aa21.32■■□□□ 1
LIME1-203ENST00000465591 PIANPQ8IYJ0 282 aa21.32■■□□□ 1
LIME1-203ENST00000465591 SPDYE1Q8NFV5 336 aaPredicted RBP21.32■■□□□ 1
LIME1-203ENST00000465591 OR2L2Q8NH16 312 aa21.32■■□□□ 1
LIME1-203ENST00000465591 ULK4Q96C45 1275 aa21.32■■□□□ 1
LIME1-203ENST00000465591 LRRC45Q96CN5 670 aa21.32■■□□□ 1
LIME1-203ENST00000465591 INSM2Q96T92 566 aaPredicted RBP21.32■■□□□ 1
LIME1-203ENST00000465591 WWP1Q9H0M0 922 aa21.32■■□□□ 1
LIME1-203ENST00000465591 SIDT1Q9NXL6 827 aaKnown RBP21.32■■□□□ 1
LIME1-203ENST00000465591 PIEZO2Q9H5I5 2752 aa21.32■■□□□ 1
LIME1-203ENST00000465591 IGLV3-16A0A075B6K0 115 aa21.31■■□□□ 1
LIME1-203ENST00000465591 STMND1H3BQB6 276 aa21.31■■□□□ 1
LIME1-203ENST00000465591 H7C0S8 307 aa21.31■■□□□ 1
LIME1-203ENST00000465591 PSMD3O43242 534 aa21.31■■□□□ 1
LIME1-203ENST00000465591 ANKRD34CP0C6C1 535 aa21.31■■□□□ 1
LIME1-203ENST00000465591 CAPZBP47756 277 aa21.31■■□□□ 1
LIME1-203ENST00000465591 PRLHRP49683 370 aa21.31■■□□□ 1
LIME1-203ENST00000465591 RHDQ02161 417 aa21.31■■□□□ 1
LIME1-203ENST00000465591 COL9A2Q14055 689 aaPredicted RBP21.31■■□□□ 1
LIME1-203ENST00000465591 CCDC38Q502W7 563 aa21.31■■□□□ 1
LIME1-203ENST00000465591 ZRANB3Q5FWF4 1079 aa21.31■■□□□ 1
LIME1-203ENST00000465591 MANEAQ5SRI9 462 aa21.31■■□□□ 1
LIME1-203ENST00000465591 SERPINA9Q86WD7 417 aa21.31■■□□□ 1
LIME1-203ENST00000465591 RBM12BQ8IXT5 1001 aaKnown RBP21.31■■□□□ 1
LIME1-203ENST00000465591 NKD1Q969G9 470 aa21.31■■□□□ 1
LIME1-203ENST00000465591 CDKN2AIPNLQ96HQ2 116 aa21.31■■□□□ 1
LIME1-203ENST00000465591 LINC00615Q96LM1 132 aaPredicted RBP21.31■■□□□ 1
LIME1-203ENST00000465591 COPS8Q99627 209 aa21.31■■□□□ 1
LIME1-203ENST00000465591 TLR10Q9BXR5 811 aa21.31■■□□□ 1
LIME1-203ENST00000465591 FRMD8P1Q9BZ68 369 aaPredicted RBP21.31■■□□□ 1
LIME1-203ENST00000465591 SPRY4Q9C004 299 aa21.31■■□□□ 1
LIME1-203ENST00000465591 IMP3Q9NV31 184 aaKnown RBP21.31■■□□□ 1
LIME1-203ENST00000465591 ZNF148Q9UQR1 794 aa21.31■■□□□ 1
LIME1-203ENST00000465591 COL6A6A6NMZ7 2263 aa21.3■■□□□ 1
LIME1-203ENST00000465591 MROH6A6NGR9 719 aa21.3■■□□□ 1
LIME1-203ENST00000465591 OR51F1A6NGY5 319 aa21.3■■□□□ 1
LIME1-203ENST00000465591 ERVH48-1M5A8F1 160 aa21.3■■□□□ 1
LIME1-203ENST00000465591 ZSCAN5DPP0CG00 497 aa21.3■■□□□ 1
LIME1-203ENST00000465591 MTHFD1P11586 935 aaKnown RBP21.3■■□□□ 1
LIME1-203ENST00000465591 PSMA3P25788 255 aa21.3■■□□□ 1
LIME1-203ENST00000465591 RAB15P59190 212 aa21.3■■□□□ 1
LIME1-203ENST00000465591 KCTD19Q17RG1 926 aaPredicted RBP21.3■■□□□ 1
LIME1-203ENST00000465591 DCAF12Q5T6F0 453 aa21.3■■□□□ 1
LIME1-203ENST00000465591 STYXQ8WUJ0 223 aa21.3■■□□□ 1
LIME1-203ENST00000465591 UBE2Q2Q8WVN8 375 aa21.3■■□□□ 1
LIME1-203ENST00000465591 RNF31Q96EP0 1072 aa21.3■■□□□ 1
LIME1-203ENST00000465591 DCUN1D1Q96GG9 259 aa21.3■■□□□ 1
LIME1-203ENST00000465591 RMDN2Q96LZ7 410 aa21.3■■□□□ 1
LIME1-203ENST00000465591 FBXO8Q9NRD0 319 aa21.3■■□□□ 1
LIME1-203ENST00000465591 ZDHHC3Q9NYG2 299 aa21.3■■□□□ 1
LIME1-203ENST00000465591 PCDHB11Q9Y5F2 797 aa21.3■■□□□ 1
LIME1-203ENST00000465591 CFAP46Q8IYW2 2715 aa21.3■■□□□ 1
LIME1-203ENST00000465591 BAHCC1Q9P281 2608 aa21.29■■□□□ 1
LIME1-203ENST00000465591 SUN1O94901 812 aa21.29■■□□□ 1
LIME1-203ENST00000465591 POLBP06746 335 aa21.29■■□□□ 1
LIME1-203ENST00000465591 ATP1B2P14415 290 aaPredicted RBP21.29■■□□□ 1
LIME1-203ENST00000465591 ACRV1P26436 265 aa21.29■■□□□ 1
LIME1-203ENST00000465591 SEPHS1P49903 392 aa21.29■■□□□ 1
LIME1-203ENST00000465591 SH3BP2P78314 561 aa21.29■■□□□ 1
LIME1-203ENST00000465591 GPR33Q49SQ1 333 aa21.29■■□□□ 1
LIME1-203ENST00000465591 ZNF658BQ4V348 819 aaPredicted RBP21.29■■□□□ 1
LIME1-203ENST00000465591 FAM92BQ6ZTR7 304 aa21.29■■□□□ 1
LIME1-203ENST00000465591 C12orf66Q96MD2 445 aa21.29■■□□□ 1
LIME1-203ENST00000465591 ASPSCR1Q9BZE9 553 aa21.29■■□□□ 1
LIME1-203ENST00000465591 PCDHGA4Q9Y5G9 962 aa21.29■■□□□ 1
LIME1-203ENST00000465591 RALBP11234 206 aa21.28■■□□□ 1
LIME1-203ENST00000465591 FDFT1P37268 417 aa21.28■■□□□ 1
LIME1-203ENST00000465591 SEMA5AQ13591 1074 aa21.28■■□□□ 1
LIME1-203ENST00000465591 DBN1Q16643 649 aa21.28■■□□□ 1
LIME1-203ENST00000465591 IRGCQ6NXR0 463 aa21.28■■□□□ 1
LIME1-203ENST00000465591 TAS2R42Q7RTR8 314 aa21.28■■□□□ 1
LIME1-203ENST00000465591 TIPARPQ7Z3E1 657 aaKnown RBP21.28■■□□□ 1
LIME1-203ENST00000465591 LINC00523Q86TU6 105 aa21.28■■□□□ 1
LIME1-203ENST00000465591 CFAP206Q8IYR0 622 aa21.28■■□□□ 1
LIME1-203ENST00000465591 CLDN19Q8N6F1 224 aa21.28■■□□□ 1
LIME1-203ENST00000465591 LSM14AQ8ND56 463 aaKnown RBP21.28■■□□□ 1
LIME1-203ENST00000465591 ALS2CR12Q96Q35 445 aa21.28■■□□□ 1
LIME1-203ENST00000465591 SEMA4CQ9C0C4 833 aa21.28■■□□□ 1
LIME1-203ENST00000465591 ZNF768Q9H5H4 540 aaKnown RBP21.28■■□□□ 1
LIME1-203ENST00000465591 RAB6BQ9NRW1 208 aa21.28■■□□□ 1
LIME1-203ENST00000465591 EPHA6Q9UF33 1036 aa21.28■■□□□ 1
LIME1-203ENST00000465591 SLC2A6Q9UGQ3 507 aa21.28■■□□□ 1
LIME1-203ENST00000465591 PILRAQ9UKJ1 303 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms