RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 SPATA17Q96L03 361 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 CFAP57Q96MR6 1250 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 RBM4Q9BWF3 364 aaKnown RBP3.05□□□□□ -1.92
GARNL3-213ENST00000464616 EDEM3Q9BZQ6 932 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 ZNF696Q9H7X3 374 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 FKRPQ9H9S5 495 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 UPF2Q9HAU5 1272 aaKnown RBP3.05□□□□□ -1.92
GARNL3-213ENST00000464616 PCDH9Q9HC56 1237 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 ACSS1Q9NUB1 689 aaPredicted RBP3.05□□□□□ -1.92
GARNL3-213ENST00000464616 SETD4Q9NVD3 440 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 NFKBIL1Q9UBC1 381 aaPredicted RBP3.05□□□□□ -1.92
GARNL3-213ENST00000464616 DNAJB4Q9UDY4 337 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 ZHX1Q9UKY1 873 aaPredicted RBP3.05□□□□□ -1.92
GARNL3-213ENST00000464616 ZNF148Q9UQR1 794 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 R3HDM2Q9Y2K5 976 aaKnown RBP3.05□□□□□ -1.92
GARNL3-213ENST00000464616 NME7Q9Y5B8 376 aa3.05□□□□□ -1.92
GARNL3-213ENST00000464616 hCG_1809904A0A1W2PP81 198 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 A0A1W2PPE2 198 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 A0A1W2PR64 198 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 LNP1A1A4G5 178 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 C15orf62A8K5M9 175 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 H0YIN7 160 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ATP2A1O14983 1001 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 KCNN4O15554 427 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 PRAMEF11O60813 436 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ENTPD3O75355 529 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 EGFP01133 1207 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ZNF883P0CG24 379 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 CTSCP53634 463 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 MVPQ14764 893 aaKnown RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 NR1D2Q14995 579 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 DECR1Q16698 335 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 CCDC96Q2M329 555 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 MMEL1Q495T6 779 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 BMP2KLQ5H9B9 411 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 KCNT1Q5JUK3 1230 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 PAPPA-AS1Q5QFB9 102 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ERMARDQ5T6L9 678 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 CST9LP1Q5W188 147 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 FAM109BQ6ICB4 259 aaPredicted RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ARHGAP11AQ6P4F7 1023 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 PAPD4Q6PIY7 484 aaKnown RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 FBXO46Q6PJ61 603 aaPredicted RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 SLC36A4Q6YBV0 504 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ZNF704Q6ZNC4 412 aaPredicted RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 KCTD8Q6ZWB6 473 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 DSG4Q86SJ6 1040 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 SDCCAG8Q86SQ7 713 aaPredicted RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 KBTBD6Q86V97 674 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ODF3L1Q8IXM7 274 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 SCYL3Q8IZE3 742 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 MAML2Q8IZL2 1156 aaPredicted RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 GUF1Q8N442 669 aaKnown RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 PAPD5Q8NDF8 572 aaKnown RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 TAS1R2Q8TE23 839 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 DUSP19Q8WTR2 217 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ZKSCAN4Q969J2 545 aaPredicted RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ERLEC1Q96DZ1 483 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 QRFPRQ96P65 431 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 DGAT2Q96PD7 388 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 RAB3IPQ96QF0 476 aaPredicted RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 SPAG5Q96R06 1193 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 HAUS8Q9BT25 410 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 SPATC1LQ9H0A9 340 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ESRP2Q9H6T0 727 aaKnown RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 TRMT1Q9NXH9 659 aaKnown RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 ANAPC2Q9UJX6 822 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 RALYQ9UKM9 306 aaKnown RBP3.04□□□□□ -1.92
GARNL3-213ENST00000464616 PADI1Q9ULC6 663 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 AMDHD2Q9Y303 409 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 GRIP1Q9Y3R0 1128 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 LOXL2Q9Y4K0 774 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 CLIC4Q9Y696 253 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 RPS6KL1Q9Y6S9 549 aa3.04□□□□□ -1.92
GARNL3-213ENST00000464616 A0A1B0GU03 582 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 A0A1W2PRQ8 180 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 TRBC2A0A5B9 178 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 PMS2P5A8MQ11 134 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 MAGEB17A8MXT2 336 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 ZNF587BE7ETH6 402 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 NDUFS4O43181 175 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 PAPSS1O43252 624 aaPredicted RBP3.03□□□□□ -1.92
GARNL3-213ENST00000464616 TSPAN1O60635 241 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 QDPRP09417 244 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 KRT5P13647 590 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 ZNF23P17027 643 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 EEF1B2P24534 225 aaKnown RBP3.03□□□□□ -1.92
GARNL3-213ENST00000464616 ALDH4A1P30038 563 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 BDKRB2P30411 391 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 RAD23AP54725 363 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 HNRNPH2P55795 449 aaKnown RBP3.03□□□□□ -1.92
GARNL3-213ENST00000464616 LINC01547P58512 204 aaPredicted RBP3.03□□□□□ -1.92
GARNL3-213ENST00000464616 EEF1A1P68104 462 aaKnown RBP3.03□□□□□ -1.92
GARNL3-213ENST00000464616 PDE1BQ01064 536 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 EFNB3Q15768 340 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 KYNUQ16719 465 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 C2orf68Q2NKX9 166 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 TMEM30BQ3MIR4 351 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 CRY2Q49AN0 593 aa3.03□□□□□ -1.92
GARNL3-213ENST00000464616 EEF1A1P5Q5VTE0 462 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms