RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TPTEP56180 551 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 MTPNP58546 118 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PHC1P78364 1004 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 YWHAHQ04917 246 aaPredicted RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 RAD51Q06609 339 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 FADDQ13158 208 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 CDK5R2Q13319 367 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 DNASE1L3Q13609 305 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NKG7Q16617 165 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 CLPPQ16740 277 aaPredicted RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 ZNF181Q2M3W8 571 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PGS1Q32NB8 556 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ATP6AP1LQ52LC2 224 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PAGE2BQ5JRK9 111 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 GPRIN3Q6ZVF9 776 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 DSG4Q86SJ6 1040 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 HIPK1Q86Z02 1210 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ADHFE1Q8IWW8 467 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 EID3Q8N140 333 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 UMODL1-AS1Q8N2C9 162 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 CHCHD4Q8N4Q1 142 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 SVOPQ8N4V2 548 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 TEX26Q8N6G2 289 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 KIAA1958Q8N8K9 716 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 FNDC5Q8NAU1 212 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ZNF548Q8NEK5 533 aaPredicted RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 OR2T12Q8NG77 320 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 RHOXF1Q8NHV9 184 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 MCOLN3Q8TDD5 553 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 GLMNQ92990 594 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 FCRL2Q96LA5 508 aaPredicted RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 NSMCE3Q96MG7 304 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PPM1MQ96MI6 270 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ZNF382Q96SR6 550 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 FAM49AQ9H0Q0 323 aaPredicted RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 GABARAPL1Q9H0R8 117 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 TPK1Q9H3S4 243 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 SMOC2Q9H3U7 446 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 DUSP21Q9H596 190 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ACTR8Q9H981 624 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NT5MQ9NPB1 228 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NDFIP2Q9NV92 336 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ZNF225Q9UK10 706 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ERVW-1Q9UQF0 538 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 GINS2Q9Y248 185 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 TPRKBQ9Y3C4 175 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 UGT2A1Q9Y4X1 527 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ORC6Q9Y5N6 252 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 GJA3Q9Y6H8 435 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 OTOFQ9HC10 1997 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 MIA3Q5JRA6 1907 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 MN1Q10571 1320 aaPredicted RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 E9PAM4 449 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 FZD9O00144 591 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 TAF4O00268 1085 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 CCL22O00626 93 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PTGESO14684 152 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 RGS13O14921 159 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 GSTA4O15217 222 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 HS6ST1O60243 411 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NOBOXO60393 691 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 UPK1BO75841 260 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PRKD3O94806 890 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 SEC24AO95486 1093 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ANGPTL1O95841 491 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 CYP11A1P05108 521 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 GSNP06396 782 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 RETP07949 1114 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 MMP3P08254 477 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PCSK1P29120 753 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 DCTP40126 519 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NRIP1P48552 1158 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 DSC2Q02487 901 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 SEMA3AQ14563 771 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 RBBP7Q16576 425 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PLA2G4EQ3MJ16 856 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ATAD3BQ5T9A4 648 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 MARC1Q5VT66 337 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 UGT3A1Q6NUS8 523 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 SPESP1Q6UW49 350 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ENPP6Q6UWR7 440 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 AKAP14Q86UN6 197 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 FAM86B1Q8N7N1 296 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PNPLA1Q8N8W4 532 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ARRDC4Q8NCT1 418 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 MYLPFQ96A32 169 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 FUBP1Q96AE4 644 aaKnown RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 TBC1D20Q96BZ9 403 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 TBATAQ96M53 351 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 DACH2Q96NX9 599 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 YME1L1Q96TA2 773 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 C17orf80Q9BSJ5 609 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 ASPSCR1Q9BZE9 553 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 SLIRPQ9GZT3 109 aaKnown RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 CCDC90BQ9GZT6 254 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 HOXD1Q9GZZ0 328 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 DSN1Q9H410 356 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 PIF1Q9H611 641 aa7.2□□□□□ -1.26
USP48-206ENST00000464577 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
USP48-206ENST00000464577 EPS8L2Q9H6S3 715 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms