RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 NDUFAF5Q5TEU4 345 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 SLC27A1Q6PCB7 646 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 INTS8Q75QN2 995 aaKnown RBP5.58□□□□□ -1.52
PTCD3-205ENST00000464541 ZNF329Q86UD4 541 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 PTOV1Q86YD1 416 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 GPALPP1Q8IXQ4 340 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 ALG14Q96F25 216 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 SLX1AQ9BQ83 275 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 APOBEC3GQ9HC16 384 aaKnown RBP5.58□□□□□ -1.52
PTCD3-205ENST00000464541 PCDHGA5Q9Y5G8 931 aa5.58□□□□□ -1.52
PTCD3-205ENST00000464541 ASTN2O75129 1339 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-205ENST00000464541 OR2A25A4D2G3 310 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 CTDSP2O14595 271 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 GPR137BO60478 399 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 LIPFP07098 398 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 INHBAP08476 426 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 DCTP40126 519 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 SNRPEP62304 92 aaKnown RBP5.57□□□□□ -1.52
PTCD3-205ENST00000464541 GFI1BQ5VTD9 330 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 SLC35E4Q6ICL7 350 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 C17orf53Q8N3J3 647 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-205ENST00000464541 POC5Q8NA72 575 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 CALML4Q96GE6 196 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 PGLYRP2Q96PD5 576 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 KIFC3Q9BVG8 833 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 SEMA6AQ9H2E6 1030 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 ARHGEF38Q9NXL2 777 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 WSB2Q9NYS7 404 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-205ENST00000464541 TMEM5Q9Y2B1 443 aa5.57□□□□□ -1.52
PTCD3-205ENST00000464541 ZNF541Q9H0D2 1346 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 VPREB1P12018 145 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 NR1D1P20393 614 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 SAT1P21673 171 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 NMBRP28336 390 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 GCH1P30793 250 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 SUOXP51687 545 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 SIRPAP78324 504 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 PPP2R2BQ00005 443 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 MBTD1Q05BQ5 628 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 DLG2Q15700 870 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 CCDC6Q16204 474 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 ZNF628Q5EBL2 1059 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 PLA2G4FQ68DD2 849 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 TAGAPQ8N103 731 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 TBC1D16Q8TBP0 767 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 STAMBPL1Q96FJ0 436 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 DUX3Q96PT4 197 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 SPATC1LQ9H0A9 340 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 HHATLQ9HCP6 504 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 CHMP1AQ9HD42 196 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-205ENST00000464541 ADD3Q9UEY8 706 aaKnown RBP5.56□□□□□ -1.52
PTCD3-205ENST00000464541 ACAD8Q9UKU7 415 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 PLAGL1Q9UM63 463 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 ZNF148Q9UQR1 794 aa5.56□□□□□ -1.52
PTCD3-205ENST00000464541 hCG_1807616A0A1W2PRN6 198 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 H1F0P07305 194 aaKnown RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 KRT19P08727 400 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 FGF5P12034 268 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 PORP16435 677 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 LMOD3Q0VAK6 560 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 MFAP5Q13361 173 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 KRT33BQ14525 404 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 FAM98BQ52LJ0 330 aaKnown RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 GCNT6Q5T4J0 391 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 ADALQ6DHV7 355 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 DHRS7BQ6IAN0 325 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 KLC3Q6P597 504 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 L3MBTL4Q8NA19 623 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 CNBD1Q8NA66 436 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 PAPD5Q8NDF8 572 aaKnown RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 GRAPLQ8TC17 118 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 ZNF473Q8WTR7 871 aaKnown RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 TM9SF4Q92544 642 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 ZNF354BQ96LW1 612 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 MRPL1Q9BYD6 325 aaKnown RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 KCNK15Q9H427 330 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 GIMAP4Q9NUV9 329 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 SLC38A7Q9NVC3 462 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 MIOSQ9NXC5 875 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 TAS2R14Q9NYV8 317 aa5.55□□□□□ -1.52
PTCD3-205ENST00000464541 LARSQ9P2J5 1176 aaKnown RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 FBXO2Q9UK22 296 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-205ENST00000464541 PRR23AA6NEV1 266 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 GRID2O43424 1007 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 AVILO75366 819 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 GCNT3O95395 438 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 ACSL1P33121 698 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 NRIP1P48552 1158 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 MELKQ14680 651 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 NTRK2Q16620 822 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 TECRLQ5HYJ1 363 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 SFMBT2Q5VUG0 894 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 SEMA4DQ92854 862 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 JAKMIP2Q96AA8 810 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 MOV10L1Q9BXT6 1211 aaKnown RBP5.54□□□□□ -1.52
PTCD3-205ENST00000464541 MMP27Q9H306 513 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 HACL1Q9UJ83 578 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 JRKLQ9Y4A0 524 aa5.54□□□□□ -1.52
PTCD3-205ENST00000464541 TEX13DA0A0J9YY54 714 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-205ENST00000464541 MED19A0JLT2 244 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms