RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 DMAP1Q9NPF5 467 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 ZNHIT6Q9NWK9 470 aaKnown RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 ADAM22Q9P0K1 906 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 PACSIN2Q9UNF0 486 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 NAALADL1Q9UQQ1 740 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 SNX10Q9Y5X0 201 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 COL12A1Q99715 3063 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 PTPRQQ9UMZ3 2332 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 PLXNB3Q9ULL4 1909 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TCRBV21S2A2A0A5A6 115 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 FAM149AA5PLN7 773 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ANKRD62A6NC57 917 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 LINC00473A8K010 186 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 MPPED1O15442 326 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CCP110O43303 1012 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 MSI1O43347 362 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TNFSF14O43557 240 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ZRANB2O95218 330 aaKnown RBP eCLIP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 LSM8O95777 96 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 FTCDO95954 541 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 APODP05090 189 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SETSIPP0DME0 302 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 GZMAP12544 262 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 GNSP15586 552 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 IL1R2P27930 398 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CYLC1P35663 651 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 GRIA3P42263 894 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 MAGEA11P43364 429 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 NSFP46459 744 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PROK1P58294 105 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SLC7A9P82251 487 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TAF10Q12962 218 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 NFE2Q16621 373 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 HLA-BQ31612 363 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 WDR45BQ5MNZ6 344 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SYCP2LQ5T4T6 812 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 MICALCLQ6ZW33 695 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TAC4Q86UU9 113 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ERICH1Q86X53 443 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 DCP1BQ8IZD4 617 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 DEFB106AQ8N104 65 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SLC35F6Q8N357 371 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ARL14EPQ8N8R7 260 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 LRRC57Q8N9N7 239 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TMEM35BQ8NCS4 154 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CCDC112Q8NEF3 446 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CADM4Q8NFZ8 388 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SLC35G2Q8TBE7 412 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SETD7Q8WTS6 366 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 KRT35Q92764 455 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 C8orf48Q96LL4 319 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 FAM81BQ96LP2 452 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CFAP57Q96MR6 1250 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TBCBQ99426 244 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 NUP85Q9BW27 656 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PDCL3Q9H2J4 239 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 IL21RQ9HBE5 538 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 RRAGDQ9NQL2 400 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TM7SF3Q9NS93 570 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 GPATCH2LQ9NWQ4 482 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SMARCAL1Q9NZC9 954 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 IL37Q9NZH6 218 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 EHD2Q9NZN4 543 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 BCCIPQ9P287 314 aaKnown RBP eCLIP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 UXTQ9UBK9 157 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 HESX1Q9UBX0 185 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 XPO7Q9UIA9 1087 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 KIAA1257Q9ULG3 409 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 GUCA1BQ9UMX6 200 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 MAGED2Q9UNF1 606 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 BZW2Q9Y6E2 419 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ATMQ13315 3056 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PIEZO2Q9H5I5 2752 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ATG2BQ96BY7 2078 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 EML5Q05BV3 1969 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 FAM92AA1XBS5 289 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 C2CD4BA6NLJ0 364 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 F5H697 171 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SLC9A3R1O14745 358 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 FLRT2O43155 660 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 RRP8O43159 456 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PROM1O43490 865 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 MED7O43513 233 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PALMO75781 387 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 OLFM2O95897 454 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CCDC175P0C221 793 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ZDHHC11BP0C7U3 371 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 HLA-EP13747 358 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 NTSR1P30989 418 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF135P52742 658 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 GSCP56915 257 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 RPL10AP62906 217 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TLE3Q04726 772 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PIGFQ07326 219 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 LLGL1Q15334 1064 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CA9Q16790 459 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CCDC14Q49A88 953 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 DCAF12L1Q5VU92 463 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PM20D1Q6GTS8 502 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms