RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 FAM72DQ6L9T8 149 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 ARMC6Q6NXE6 501 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 RFLNAQ6ZTI6 216 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 CEP128Q6ZU80 1094 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 TSPAN33Q86UF1 283 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 FAM72BQ86X60 149 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 ZDHHC17Q8IUH5 632 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 WDTC1Q8N5D0 677 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 CPSF7Q8N684 471 aaKnown RBP12.95□□□□□ -0.34
C9orf3-211ENST00000463372 C1orf131Q8NDD1 294 aaKnown RBP12.95□□□□□ -0.34
C9orf3-211ENST00000463372 MENTQ9BUN1 341 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 BDH2Q9BUT1 245 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 CINPQ9BW66 212 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-211ENST00000463372 GTPBP4Q9BZE4 634 aaKnown RBP12.95□□□□□ -0.34
C9orf3-211ENST00000463372 CARD9Q9H257 536 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 HRASLS2Q9NWW9 162 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 SMC3Q9UQE7 1217 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 CDYLQ9Y232 598 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 DNAJC16Q9Y2G8 782 aa12.95□□□□□ -0.34
C9orf3-211ENST00000463372 ADAM10O14672 748 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 CETN3O15182 167 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 MAP3K7O43318 606 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 F10P00742 488 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 UQCRHP07919 91 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 PREPP48147 710 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 AP1S1P61966 158 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 GCNT1Q02742 428 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 TDRD12Q587J7 1177 aaKnown RBP12.94□□□□□ -0.34
C9orf3-211ENST00000463372 FAM173BQ6P4H8 233 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 SHC4Q6S5L8 630 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 ABRAXAS1Q6UWZ7 409 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 PASD1Q8IV76 773 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 RTL3Q8N8U3 475 aaKnown RBP12.94□□□□□ -0.34
C9orf3-211ENST00000463372 CCDC110Q8TBZ0 833 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 RIOK2Q9BVS4 552 aaKnown RBP12.94□□□□□ -0.34
C9orf3-211ENST00000463372 SGPP1Q9BX95 441 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 AP1M1Q9BXS5 423 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 NEU3Q9UQ49 428 aa12.94□□□□□ -0.34
C9orf3-211ENST00000463372 PHF3Q92576 2039 aaKnown RBP12.94□□□□□ -0.34
C9orf3-211ENST00000463372 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-211ENST00000463372 OR5K3A6NET4 321 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 J3KR12 359 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 KLK8O60259 260 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 CNOT3O75175 753 aaKnown RBP12.93□□□□□ -0.34
C9orf3-211ENST00000463372 TPOP07202 933 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 NSUN2Q08J23 767 aaKnown RBP eCLIP12.93□□□□□ -0.34
C9orf3-211ENST00000463372 STK38Q15208 465 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 PCBP2Q15366 365 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■□□ 15.6
C9orf3-211ENST00000463372 AGAP9Q5VTM2 703 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 FBXO38Q6PIJ6 1188 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 USP45Q70EL2 814 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 OOSP2Q86WS3 158 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 GPR135Q8IZ08 494 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 C3orf20Q8ND61 904 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 SCRN2Q96FV2 425 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 USP28Q96RU2 1077 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 PDFQ9HBH1 243 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 PTGFRNQ9P2B2 879 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 CNTN6Q9UQ52 1028 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 RNF6Q9Y252 685 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 L3MBTL1Q9Y468 752 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 FHOD1Q9Y613 1164 aa12.93□□□□□ -0.34
C9orf3-211ENST00000463372 WASH4PA8MWX3 477 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 PHF1O43189 567 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-211ENST00000463372 SPRY1O43609 319 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-211ENST00000463372 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 USP1O94782 785 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 PRAMEF1O95521 474 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 CDH3P22223 829 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 HALP42357 657 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 CTSCP53634 463 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 DRG2P55039 364 aaKnown RBP12.92□□□□□ -0.34
C9orf3-211ENST00000463372 ALDH6A1Q02252 535 aaKnown RBP12.92□□□□□ -0.34
C9orf3-211ENST00000463372 CETN1Q12798 172 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 Q5PR19 223 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 TMEM211Q6ICI0 200 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 MRPL14Q6P1L8 145 aaKnown RBP12.92□□□□□ -0.34
C9orf3-211ENST00000463372 CRTC3Q6UUV7 619 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 KIRREL2Q6UWL6 708 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 P3H2Q8IVL5 708 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 PROKR1Q8TCW9 393 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 ZFPM2Q8WW38 1151 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 CFAP57Q96MR6 1250 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 TSPAN10Q9H1Z9 355 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-211ENST00000463372 CATSPERBQ9H7T0 1116 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 BEX4Q9NWD9 120 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-211ENST00000463372 TRIM10Q9UDY6 481 aa12.92□□□□□ -0.34
C9orf3-211ENST00000463372 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.91□□□□□ -0.341e-7■■□□□ 11.9
C9orf3-211ENST00000463372 NPIPA5E9PKD4 350 aa12.91□□□□□ -0.34
C9orf3-211ENST00000463372 SOCS5O75159 536 aa12.91□□□□□ -0.34
C9orf3-211ENST00000463372 MSL3P1P0C860 447 aa12.91□□□□□ -0.34
C9orf3-211ENST00000463372 ZNF8P17098 575 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-211ENST00000463372 EPHB2P29323 1055 aa12.91□□□□□ -0.34
C9orf3-211ENST00000463372 FMO5P49326 533 aa12.91□□□□□ -0.34
C9orf3-211ENST00000463372 DCAF7P61962 342 aa12.91□□□□□ -0.34
C9orf3-211ENST00000463372 OLIG2Q13516 323 aa12.91□□□□□ -0.34
C9orf3-211ENST00000463372 PTPRRQ15256 657 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms