RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CLPBQ9H078 707 aa16.7■□□□□ 0.26
ACTB-207ENST00000462494 SOX17Q9H6I2 414 aaPredicted RBP16.7■□□□□ 0.26
ACTB-207ENST00000462494 IPPKQ9H8X2 491 aa16.7■□□□□ 0.26
ACTB-207ENST00000462494 KANSL1LA0AUZ9 987 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 K7ERQ8 282 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 ARVCFO00192 962 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 FFAR2O15552 330 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 LDLRP01130 860 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 ENO2P09104 434 aaPredicted RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 UMPSP11172 480 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 BMP1P13497 986 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 HMOX2P30519 316 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 ADARP55265 1226 aaKnown RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 SELPLGQ14242 412 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 AP5B1Q2VPB7 878 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 SBSNQ6UWP8 590 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 ADAMTSL2Q86TH1 951 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 TNIP2Q8NFZ5 429 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 OVCA2Q8WZ82 227 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 SEPT8Q92599 483 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 CHID1Q9BWS9 393 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 APOL5Q9BWW9 433 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 NSUN3Q9H649 340 aaKnown RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 TNPO3Q9Y5L0 923 aaKnown RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 FADS3Q9Y5Q0 445 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 A0A087WXM4 84 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 LSM1O15116 133 aaKnown RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 TRIM16O95361 564 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 BMP10O95393 424 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 PRAMEF1O95521 474 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 HTR1EP28566 365 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 PIK3CGP48736 1102 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 ALDH7A1P49419 539 aaKnown RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 CDK9P50750 372 aaKnown RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 PCBP2Q15366 365 aaKnown RBP eCLIP16.69■□□□□ 0.261e-10■■□□□ 14.1
ACTB-207ENST00000462494 RFTN2Q52LD8 501 aaPredicted RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 MILR1Q7Z6M3 343 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 SERPINA9Q86WD7 417 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 PROSER1Q86XN7 944 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 FAM126BQ8IXS8 530 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 CLDN19Q8N6F1 224 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 SLC43A3Q8NBI5 491 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 NSMCE2Q96MF7 247 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 TMEM175Q9BSA9 504 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 FEM1AQ9BSK4 669 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 KLF16Q9BXK1 252 aaPredicted RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 MRPL9Q9BYD2 267 aaKnown RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 SMPD3Q9NY59 655 aaPredicted RBP16.69■□□□□ 0.26
ACTB-207ENST00000462494 ATXN10Q9UBB4 475 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 MTRRQ9UBK8 725 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 TET1Q8NFU7 2136 aa16.69■□□□□ 0.26
ACTB-207ENST00000462494 GOLGA8CPA6NN73 597 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 RAD51BO15315 384 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 RSL1D1O76021 490 aaKnown RBP16.68■□□□□ 0.26
ACTB-207ENST00000462494 MBL2P11226 248 aaPredicted RBP16.68■□□□□ 0.26
ACTB-207ENST00000462494 CA5AP35218 305 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 HMGCLP35914 325 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 RPS9P46781 194 aaKnown RBP16.68■□□□□ 0.26
ACTB-207ENST00000462494 RPS6KA3P51812 740 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 ESRRGP62508 458 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 KCTD21Q4G0X4 260 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 ARMC12Q5T9G4 340 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 DLEU7Q6UYE1 221 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 GPR141Q7Z602 305 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 DHRSXQ8N5I4 330 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 PHF12Q96QT6 1004 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 EGFL8Q99944 293 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 HEBP1Q9NRV9 189 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 ANGPTL3Q9Y5C1 460 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 PCDHB1Q9Y5F3 818 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 CASP8AP2Q9UKL3 1982 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 A8MX80 341 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 FFAR3O14843 346 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 GPR42O15529 346 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 SNAP29O95721 258 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 OTCP00480 354 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 SLC2A4P14672 509 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 ZNF7P17097 686 aaPredicted RBP16.68■□□□□ 0.26
ACTB-207ENST00000462494 CSKP41240 450 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 GDF5P43026 501 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
ACTB-207ENST00000462494 PYCR3Q53H96 274 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 OTUD3Q5T2D3 398 aaPredicted RBP16.68■□□□□ 0.26
ACTB-207ENST00000462494 ALDH16A1Q8IZ83 802 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 LKAAEAR1Q8TD35 194 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 MYO19Q96H55 970 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 ACTL8Q9H568 366 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 ASB8Q9H765 288 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 VPS51Q9UID3 782 aa16.68■□□□□ 0.26
ACTB-207ENST00000462494 HEMK1Q9Y5R4 338 aaPredicted RBP16.68■□□□□ 0.26
ACTB-207ENST00000462494 FZD6O60353 706 aa16.67■□□□□ 0.26
ACTB-207ENST00000462494 SLC25A14O95258 325 aaPredicted RBP16.67■□□□□ 0.26
ACTB-207ENST00000462494 NPPAP01160 153 aa16.67■□□□□ 0.26
ACTB-207ENST00000462494 GKP32189 559 aa16.67■□□□□ 0.26
ACTB-207ENST00000462494 CAPGP40121 348 aa16.67■□□□□ 0.26
ACTB-207ENST00000462494 RPL38P63173 70 aaKnown RBP16.67■□□□□ 0.26
ACTB-207ENST00000462494 CDH18Q13634 790 aa16.67■□□□□ 0.26
ACTB-207ENST00000462494 TBPL2Q6SJ96 375 aa16.67■□□□□ 0.26
ACTB-207ENST00000462494 CLVS1Q8IUQ0 354 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms