RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 OR5K3A6NET4 321 aa15.05■□□□□ -0
SKA3-204ENST00000462482 TLCD2A6NGC4 264 aa15.05■□□□□ -0
SKA3-204ENST00000462482 C2orf81A6NN90 581 aa15.05■□□□□ -0
SKA3-204ENST00000462482 HACD1B0YJ81 288 aa15.05■□□□□ -0
SKA3-204ENST00000462482 F5H423 210 aaPredicted RBP15.05■□□□□ -0
SKA3-204ENST00000462482 MAP3K7O43318 606 aa15.05■□□□□ -0
SKA3-204ENST00000462482 MFAP3LO75121 409 aa15.05■□□□□ -0
SKA3-204ENST00000462482 SLC35G4P0C7Q5 338 aa15.05■□□□□ -0
SKA3-204ENST00000462482 RALBP11234 206 aa15.05■□□□□ -0
SKA3-204ENST00000462482 MTHFD1P11586 935 aaKnown RBP15.05■□□□□ -0
SKA3-204ENST00000462482 FOLR1P15328 257 aa15.05■□□□□ -0
SKA3-204ENST00000462482 CHRNA4P43681 627 aa15.05■□□□□ -0
SKA3-204ENST00000462482 CTSCP53634 463 aa15.05■□□□□ -0
SKA3-204ENST00000462482 GEMP55040 296 aa15.05■□□□□ -0
SKA3-204ENST00000462482 NFE2L1Q14494 772 aa15.05■□□□□ -0
SKA3-204ENST00000462482 GSE1Q14687 1217 aa15.05■□□□□ -0
SKA3-204ENST00000462482 TFDP3Q5H9I0 405 aa15.05■□□□□ -0
SKA3-204ENST00000462482 FNBP1LQ5T0N5 605 aa15.05■□□□□ -0
SKA3-204ENST00000462482 PWWP2BQ6NUJ5 590 aa15.05■□□□□ -0
SKA3-204ENST00000462482 CNGA4Q8IV77 575 aa15.05■□□□□ -0
SKA3-204ENST00000462482 RCOR2Q8IZ40 523 aa15.05■□□□□ -0
SKA3-204ENST00000462482 EFCAB3Q8N7B9 438 aa15.05■□□□□ -0
SKA3-204ENST00000462482 OR8K5Q8NH50 307 aa15.05■□□□□ -0
SKA3-204ENST00000462482 ZNF398Q8TD17 642 aa15.05■□□□□ -0
SKA3-204ENST00000462482 ZFPM2Q8WW38 1151 aa15.05■□□□□ -0
SKA3-204ENST00000462482 THAP4Q8WY91 577 aa15.05■□□□□ -0
SKA3-204ENST00000462482 LRRC45Q96CN5 670 aa15.05■□□□□ -0
SKA3-204ENST00000462482 DCUN1D1Q96GG9 259 aa15.05■□□□□ -0
SKA3-204ENST00000462482 MRGPRX2Q96LB1 330 aa15.05■□□□□ -0
SKA3-204ENST00000462482 C12orf66Q96MD2 445 aa15.05■□□□□ -0
SKA3-204ENST00000462482 MAP3K3Q99759 626 aa15.05■□□□□ -0
SKA3-204ENST00000462482 ACTL8Q9H568 366 aa15.05■□□□□ -0
SKA3-204ENST00000462482 FANCEQ9HB96 536 aa15.05■□□□□ -0
SKA3-204ENST00000462482 SOHLH2Q9NX45 425 aa15.05■□□□□ -0
SKA3-204ENST00000462482 SEMA5BQ9P283 1151 aa15.05■□□□□ -0
SKA3-204ENST00000462482 TLK1Q9UKI8 766 aa15.05■□□□□ -0
SKA3-204ENST00000462482 COLEC10Q9Y6Z7 277 aa15.05■□□□□ -0
SKA3-204ENST00000462482 UBR5O95071 2799 aaPredicted RBP15.04■□□□□ -0
SKA3-204ENST00000462482 MGAT4DA6NG13 374 aa15.04■□□□□ -0
SKA3-204ENST00000462482 CYSRT1A8MQ03 144 aa15.04■□□□□ -0
SKA3-204ENST00000462482 BUD23O43709 281 aaKnown RBP15.04■□□□□ -0
SKA3-204ENST00000462482 CPNE3O75131 537 aaKnown RBP15.04■□□□□ -0
SKA3-204ENST00000462482 ANXA9O76027 345 aa15.04■□□□□ -0
SKA3-204ENST00000462482 PRAMEF1O95521 474 aa15.04■□□□□ -0
SKA3-204ENST00000462482 NTRK1P04629 796 aa15.04■□□□□ -0
SKA3-204ENST00000462482 KLK3P07288 261 aaPredicted RBP15.04■□□□□ -0
SKA3-204ENST00000462482 EBLN1P0CF75 366 aa15.04■□□□□ -0
SKA3-204ENST00000462482 PECAM1P16284 738 aaPredicted RBP15.04■□□□□ -0
SKA3-204ENST00000462482 TUBB4BP68371 445 aa15.04■□□□□ -0
SKA3-204ENST00000462482 SRSF1Q07955 248 aaKnown RBP eCLIP15.04■□□□□ -01e-8■■■■□ 26.4
SKA3-204ENST00000462482 PRKAA1Q13131 559 aa15.04■□□□□ -0
SKA3-204ENST00000462482 TUBB2AQ13885 445 aa15.04■□□□□ -0
SKA3-204ENST00000462482 KCNAB1Q14722 419 aa15.04■□□□□ -0
SKA3-204ENST00000462482 TCEAL1Q15170 157 aa15.04■□□□□ -0
SKA3-204ENST00000462482 LLGL1Q15334 1064 aa15.04■□□□□ -0
SKA3-204ENST00000462482 METRNLQ641Q3 311 aa15.04■□□□□ -0
SKA3-204ENST00000462482 ITPRIPL1Q6GPH6 555 aa15.04■□□□□ -0
SKA3-204ENST00000462482 DET1Q7L5Y6 550 aa15.04■□□□□ -0
SKA3-204ENST00000462482 TMEM126BQ8IUX1 230 aa15.04■□□□□ -0
SKA3-204ENST00000462482 VSTM4Q8IW00 320 aa15.04■□□□□ -0
SKA3-204ENST00000462482 ZNF567Q8N184 647 aa15.04■□□□□ -0
SKA3-204ENST00000462482 CARFQ8N187 725 aa15.04■□□□□ -0
SKA3-204ENST00000462482 FAM26EQ8N5C1 309 aa15.04■□□□□ -0
SKA3-204ENST00000462482 GPR150Q8NGU9 434 aa15.04■□□□□ -0
SKA3-204ENST00000462482 HAUS1Q96CS2 278 aa15.04■□□□□ -0
SKA3-204ENST00000462482 RBM41Q96IZ5 413 aaKnown RBP15.04■□□□□ -0
SKA3-204ENST00000462482 TUBB2BQ9BVA1 445 aa15.04■□□□□ -0
SKA3-204ENST00000462482 WWP1Q9H0M0 922 aa15.04■□□□□ -0
SKA3-204ENST00000462482 KCND1Q9NSA2 647 aa15.04■□□□□ -0
SKA3-204ENST00000462482 SMOXQ9NWM0 555 aa15.04■□□□□ -0
SKA3-204ENST00000462482 G3BP2Q9UN86 482 aaKnown RBP15.04■□□□□ -0
SKA3-204ENST00000462482 PLAAQ9Y263 795 aa15.04■□□□□ -0
SKA3-204ENST00000462482 OR6C74A6NCV1 312 aa15.03■□□□□ -0
SKA3-204ENST00000462482 CFAP99D6REC4 459 aa15.03■□□□□ -0
SKA3-204ENST00000462482 H7C0C1 242 aa15.03■□□□□ -0
SKA3-204ENST00000462482 VPS4BO75351 444 aa15.03■□□□□ -0
SKA3-204ENST00000462482 SCRG1O75711 98 aa15.03■□□□□ -0
SKA3-204ENST00000462482 STK10O94804 968 aaKnown RBP15.03■□□□□ -0
SKA3-204ENST00000462482 ZBTB11O95625 1053 aaPredicted RBP15.03■□□□□ -0
SKA3-204ENST00000462482 FURINP09958 794 aa15.03■□□□□ -0
SKA3-204ENST00000462482 NR1D1P20393 614 aa15.03■□□□□ -0
SKA3-204ENST00000462482 LPOP22079 712 aaPredicted RBP15.03■□□□□ -0
SKA3-204ENST00000462482 NDUFS1P28331 727 aa15.03■□□□□ -0
SKA3-204ENST00000462482 PTPN4P29074 926 aa15.03■□□□□ -0
SKA3-204ENST00000462482 ATP5OP48047 213 aa15.03■□□□□ -0
SKA3-204ENST00000462482 PPP1CAP62136 330 aa15.03■□□□□ -0
SKA3-204ENST00000462482 PRPSAP1Q14558 356 aa15.03■□□□□ -0
SKA3-204ENST00000462482 TAZQ16635 292 aa15.03■□□□□ -0
SKA3-204ENST00000462482 UGT8Q16880 541 aa15.03■□□□□ -0
SKA3-204ENST00000462482 ZNF449Q6P9G9 518 aa15.03■□□□□ -0
SKA3-204ENST00000462482 FAM83HQ6ZRV2 1179 aaPredicted RBP15.03■□□□□ -0
SKA3-204ENST00000462482 SYVN1Q86TM6 617 aa15.03■□□□□ -0
SKA3-204ENST00000462482 APLFQ8IW19 511 aaPredicted RBP15.03■□□□□ -0
SKA3-204ENST00000462482 KATNAL2Q8IYT4 538 aa15.03■□□□□ -0
SKA3-204ENST00000462482 MR1Q95460 341 aa15.03■□□□□ -0
SKA3-204ENST00000462482 OXNAD1Q96HP4 312 aaPredicted RBP15.03■□□□□ -0
SKA3-204ENST00000462482 QKIQ96PU8 341 aaKnown RBP eCLIP15.03■□□□□ -0
SKA3-204ENST00000462482 ASB8Q9H765 288 aa15.03■□□□□ -0
SKA3-204ENST00000462482 LUC7LQ9NQ29 371 aaKnown RBP15.03■□□□□ -0
SKA3-204ENST00000462482 FAM8A1Q9UBU6 413 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 259.6 ms