RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 RRADP55042 308 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 ITGA1P56199 1179 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 CDK18Q07002 472 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 PPIDQ08752 370 aaKnown RBP10.59□□□□□ -0.71
CBX3-205ENST00000462165 PDK2Q15119 407 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 ATP13A5Q4VNC0 1218 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 ZRANB3Q5FWF4 1079 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 TMTC4Q5T4D3 741 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 C1QL3Q5VWW1 255 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 LCN10Q6JVE6 187 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 AMZ2Q86W34 360 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 OOSP2Q86WS3 158 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 IQCKQ8N0W5 287 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 ZBTB2Q8N680 514 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 PQLC3Q8N755 202 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 TTC13Q8NBP0 860 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 KCTD6Q8NC69 237 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 CCNYQ8ND76 341 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 CPT1BQ92523 772 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 TADA1Q96BN2 335 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 IMP4Q96G21 291 aaKnown RBP10.59□□□□□ -0.71
CBX3-205ENST00000462165 TTC25Q96NG3 672 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 SRPK1Q96SB4 655 aaKnown RBP10.59□□□□□ -0.71
CBX3-205ENST00000462165 THAP2Q9H0W7 228 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 ASF1BQ9NVP2 202 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 HRASLS2Q9NWW9 162 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 PSMD13Q9UNM6 376 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 BTRCQ9Y297 605 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 APCP25054 2843 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 FBN2P35556 2912 aa10.59□□□□□ -0.71
CBX3-205ENST00000462165 FER1L5A0AVI2 2057 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 AKAP9Q99996 3911 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 A6NL46 340 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 POP7O75817 140 aaKnown RBP10.58□□□□□ -0.72
CBX3-205ENST00000462165 CYP1A2P05177 515 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 MTHFD1P11586 935 aaKnown RBP10.58□□□□□ -0.72
CBX3-205ENST00000462165 SSR1P43307 286 aaKnown RBP10.58□□□□□ -0.72
CBX3-205ENST00000462165 ABRQ12979 859 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 SLC14A2Q15849 920 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 STX1AQ16623 288 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 PLEKHN1Q494U1 663 aaPredicted RBP10.58□□□□□ -0.72
CBX3-205ENST00000462165 VWA5B1Q5TIE3 1220 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 PRAMEF17Q5VTA0 474 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 SASS6Q6UVJ0 657 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 FAM198BQ6UWH4 519 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 FAM83HQ6ZRV2 1179 aaPredicted RBP10.58□□□□□ -0.72
CBX3-205ENST00000462165 NT5DC3Q86UY8 548 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 MAP7D3Q8IWC1 876 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 SLC34A3Q8N130 599 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 GDAP1Q8TB36 358 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 DTX3LQ8TDB6 740 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 ZFPM2Q8WW38 1151 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 SGSM3Q96HU1 749 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 ZNF830Q96NB3 372 aaPredicted RBP10.58□□□□□ -0.72
CBX3-205ENST00000462165 SLC25A51Q9H1U9 297 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 CBX8Q9HC52 389 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 TMEM63CQ9P1W3 806 aa10.58□□□□□ -0.72
CBX3-205ENST00000462165 DNMT3AQ9Y6K1 912 aaPredicted RBP10.58□□□□□ -0.72
CBX3-205ENST00000462165 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
CBX3-205ENST00000462165 PCM1Q15154 2024 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 CROCCQ5TZA2 2017 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 ANKUB1A6NFN9 424 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 AURKAO14965 403 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 MSL3P1P0C860 447 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 HMGCLP35914 325 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 GJC1P36383 396 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 KPNA2P52292 529 aaKnown RBP10.57□□□□□ -0.72
CBX3-205ENST00000462165 CTSCP53634 463 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 ATP1A4Q13733 1029 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 NFE2L1Q14494 772 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 PCSK7Q16549 785 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 LDLRAP1Q5SW96 308 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 FAM182AQ5T1J6 154 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 FAM69BQ5VUD6 431 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 METRNLQ641Q3 311 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 HGSNATQ68CP4 663 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 RAB43Q86YS6 212 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 SYTL1Q8IYJ3 562 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 TTC30BQ8N4P2 665 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 CISD2Q8N5K1 135 aaKnown RBP10.57□□□□□ -0.72
CBX3-205ENST00000462165 CLIP3Q96DZ5 547 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 RANBP9Q96S59 729 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 BARD1Q99728 777 aaKnown RBP10.57□□□□□ -0.72
CBX3-205ENST00000462165 CEP41Q9BYV8 373 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 ZCCHC2Q9C0B9 1178 aaKnown RBP10.57□□□□□ -0.72
CBX3-205ENST00000462165 FANCEQ9HB96 536 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 SYTL2Q9HCH5 934 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 BPIFA1Q9NP55 256 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 IGSF5Q9NSI5 407 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 LMBRD1Q9NUN5 540 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 IMP3Q9NV31 184 aaKnown RBP10.57□□□□□ -0.72
CBX3-205ENST00000462165 PCMTD2Q9NV79 361 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 SOHLH2Q9NX45 425 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.57□□□□□ -0.72
CBX3-205ENST00000462165 B3GNT3Q9Y2A9 372 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 SPO11Q9Y5K1 396 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 CFAP20Q9Y6A4 193 aaKnown RBP10.57□□□□□ -0.72
CBX3-205ENST00000462165 MDC1Q14676 2089 aaKnown RBP10.57□□□□□ -0.72
CBX3-205ENST00000462165 NUP210LQ5VU65 1888 aa10.57□□□□□ -0.72
CBX3-205ENST00000462165 CSMD2Q7Z408 3487 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms