RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 SLC2A4P14672 509 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 XRCC1P18887 633 aaPredicted RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 RPS3P23396 243 aaKnown RBP eCLIP11.89□□□□□ -0.514e-7■■□□□ 12.8
ERGIC3-211ENST00000461043 RPL10P27635 214 aaKnown RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 PPARGP37231 505 aaPredicted RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 ELK3P41970 407 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 GPR3P46089 330 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 ADARP55265 1226 aaKnown RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 FOXC1Q12948 553 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 CALCOCO2Q13137 446 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 FRG1Q14331 258 aaKnown RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 CLCA4Q14CN2 919 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 FASTKD3Q14CZ7 662 aaKnown RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 LONRF1Q17RB8 773 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 SPANXN3Q5MJ09 141 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 CENPUQ71F23 418 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 SPRED1Q7Z699 444 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 CTAGE6Q86UF2 777 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 TMPRSS12Q86WS5 348 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 LRRC6Q86X45 466 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 CCNJLQ8IV13 435 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 CTAGE4Q8IX94 777 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 UNC5BQ8IZJ1 945 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 LILRA3Q8N6C8 439 aaPredicted RBP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 BIRC8Q96P09 236 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 TTC1Q99614 292 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 PHACTR1Q9C0D0 580 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 COG4Q9H9E3 785 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 VPS37BQ9H9H4 285 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 L2HGDHQ9H9P8 463 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 CPNE7Q9UBL6 633 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 ACSL5Q9ULC5 683 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 CFAP47Q6ZTR5 3102 aa11.89□□□□□ -0.51
ERGIC3-211ENST00000461043 TRBV23OR9-2A0A075B6M9 112 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 A0A1W2PQM1 296 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 OR52A4PA6NMU1 304 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 PDZK1P1A8MUH7 402 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 EIF3HO15372 352 aaKnown RBP eCLIP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 B4GAT1O43505 415 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 ZNF500O60304 480 aaPredicted RBP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 TCEA3O75764 348 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 S1PR4O95977 384 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 OR56A5P0C7T3 313 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 PBLDP30039 288 aaPredicted RBP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 SLC19A1P41440 591 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 PDX1P52945 283 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CLDN6P56747 220 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 SLC7A5Q01650 507 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CAV1Q03135 178 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 RPA4Q13156 261 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 SEPT7Q16181 437 aaKnown RBP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CCDC157Q569K6 752 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 HES3Q5TGS1 186 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 ZNF470Q6ECI4 717 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CAPRIN2Q6IMN6 1127 aaKnown RBP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 UNC5AQ6ZN44 842 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CNTN4Q8IWV2 1026 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 LMNTD2Q8IXW0 634 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CFAP206Q8IYR0 622 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CEP112Q8N8E3 955 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 DCBLD1Q8N8Z6 715 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 AVL9Q8NBF6 648 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 WDR48Q8TAF3 677 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 FBXO25Q8TCJ0 367 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 LKAAEAR1Q8TD35 194 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 RMDN2Q96LZ7 410 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CARD6Q9BX69 1037 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 OR52A5Q9H2C5 316 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 UCK1Q9HA47 277 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 EPB41L5Q9HCM4 733 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 C20orf96Q9NUD7 363 aaPredicted RBP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 ZDHHC18Q9NUE0 388 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 INTS10Q9NVR2 710 aaKnown RBP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 DMGDHQ9UI17 866 aaKnown RBP11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 KLK13Q9UKR3 277 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 CHMP2BQ9UQN3 213 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 NEUROG3Q9Y4Z2 214 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 RP1P56715 2156 aa11.88□□□□□ -0.51
ERGIC3-211ENST00000461043 ESYT3A0FGR9 886 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 SLC5A10A0PJK1 596 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 RHPN2P1A8MT19 583 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 LIN7AO14910 233 aaPredicted RBP11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 NDUFS3O75489 264 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 FTH1P02794 183 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 SLC1A2P43004 574 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 PLTPP55058 493 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 OR1D5P58170 312 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 CCL7P80098 99 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 FOXK2Q01167 660 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 HHEXQ03014 270 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 PDIA2Q13087 525 aaKnown RBP11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 SQSTM1Q13501 440 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 RPE65Q16518 533 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 HSP90AA5PQ58FG0 334 aa11.87□□□□□ -0.51
ERGIC3-211ENST00000461043 ZNF789Q5FWF6 425 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms