RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TUBA1AQ71U36 451 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 BZW1Q7L1Q6 419 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 RSRC2Q7L4I2 434 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 DNAJB7Q7Z6W7 309 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PCGF5Q86SE9 256 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 GPR149Q86SP6 731 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TMEM150AQ86TG1 271 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MOGAT3Q86VF5 341 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TMC8Q8IU68 726 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CRYBG2Q8N1P7 616 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 WDTC1Q8N5D0 677 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PDPRQ8NCN5 879 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CLEC4CQ8WTT0 213 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 IRGQQ8WZA9 623 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 SHC3Q92529 594 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 RUBCNQ92622 972 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 WBP2Q969T9 261 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 SKA1Q96BD8 255 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 RSPRY1Q96DX4 576 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MCRS1Q96EZ8 462 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF764Q96H86 408 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PIWIL1Q96J94 861 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PPM1MQ96MI6 270 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MOGAT1Q96PD6 335 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC22A12Q96S37 553 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 DCLRE1CQ96SD1 692 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CYP2S1Q96SQ9 504 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PCDHB18PQ96TA0 734 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PRPF18Q99633 342 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MESP1Q9BRJ9 268 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PCDHAC1Q9H158 963 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CYP3A43Q9HB55 503 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 VCX3AQ9NNX9 186 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 COMMD8Q9NX08 183 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 SEPT10Q9P0V9 454 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 HESX1Q9UBX0 185 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CHORDC1Q9UHD1 332 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 EIF2B4Q9UI10 523 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CD207Q9UJ71 328 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TSPAN16Q9UKR8 245 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CDH9Q9ULB4 789 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 OBSL1O75147 1896 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 BPTFQ12830 3046 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 ANAPC1Q9H1A4 1944 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MYO16Q9Y6X6 1858 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 DENND4CQ5VZ89 1909 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ATG2BQ96BY7 2078 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CENPVL1A0A0U1RR11 272 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ARHGEF37A1IGU5 675 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 GTPBP10A4D1E9 387 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 LRRC53A6NM62 1247 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 DRGXA6NNA5 263 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ZAR1LA6NP61 321 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 C2CD4DB7Z1M9 353 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 HHLA1C9JL84 531 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 H3BQF6 201 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 J3KRW8 73 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 LSM1O15116 133 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ASNA1O43681 348 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 PRSS23O95084 383 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 TBX18O95935 607 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 GYPCP04921 128 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 EIF2S1P05198 315 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 RHOP08100 348 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ITGA2BP08514 1039 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 P4HA1P13674 534 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 EGR1P18146 543 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 TNFAIP3P21580 790 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 GABRR2P28476 465 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ALDH3A1P30838 453 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 S100A5P33763 92 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 MAN1A1P33908 653 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ACADVLP49748 655 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF75DP51815 510 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 POLE2P56282 527 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 GEMIN4P57678 1058 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CTAG1AP78358 180 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 MRPS35P82673 323 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 GCNT1Q02742 428 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 BOP1Q14137 746 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 WHAMMP3Q1A5X7 153 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC153Q494R4 210 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CYP4A22Q5TCH4 519 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 TPGS2Q68CL5 300 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 TXNDC8Q6A555 127 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 FCRL6Q6DN72 434 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 LIN54Q6MZP7 749 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 PMF1Q6P1K2 205 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 KLHL17Q6TDP4 642 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 Q6YL49 198 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 TMEM184AQ6ZMB5 413 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 NCCRP1Q6ZVX7 275 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 MAATS1Q7Z4T9 603 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 PIGZQ86VD9 579 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 KRT73Q86Y46 540 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 GATAD2AQ86YP4 633 aa4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 CCDC117Q8IWD4 279 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-203ENST00000460928 LRRC8AQ8IWT6 810 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms