RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 TFB1MQ8WVM0 346 aaKnown RBP16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 MARVELD3Q96A59 401 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 MS4A14Q96JA4 679 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 ZNF599Q96NL3 588 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 TGM7Q96PF1 710 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 TSGA13Q96PP4 275 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 MCCC1Q96RQ3 725 aaPredicted RBP16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 MFRPQ9BY79 579 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 UCK1Q9HA47 277 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 OGFRQ9NZT2 677 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 VPS18Q9P253 973 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 G3BP2Q9UN86 482 aaKnown RBP16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 SAR1BQ9Y6B6 198 aa16.33■□□□□ 0.2
TMEM50B-205ENST00000459909 TTC24A2A3L6 582 aaPredicted RBP16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 CES2O00748 559 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 ZNF185O15231 689 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 MATN3O15232 486 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 SNX2O60749 519 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 ASMTLO95671 621 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 RPS15P62841 145 aaKnown RBP16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 XRCC4Q13426 336 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 MARC1Q5VT66 337 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 DARS2Q6PI48 645 aaKnown RBP16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 USP45Q70EL2 814 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 ZNF765Q7L2R6 523 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 PRSS42Q7Z5A4 293 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 ZNF592Q92610 1267 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 C19orf60Q96EN9 201 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 RUFY1Q96T51 708 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 KCNK6Q9Y257 313 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 R3HDM2Q9Y2K5 976 aaKnown RBP16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 PRKAB1Q9Y478 270 aa16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 PCYT1BQ9Y5K3 369 aaPredicted RBP16.32■□□□□ 0.2
TMEM50B-205ENST00000459909 HACD1B0YJ81 288 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 KCNK1O00180 336 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 PGRMC1O00264 195 aaKnown RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 FANCGO15287 622 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 RASSF9O75901 435 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 UBXN7O94888 489 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 RBP3P10745 1247 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 PRF1P14222 555 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 AMD1P17707 334 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 HSPA9P38646 679 aaKnown RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 MMP13P45452 471 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 RPS18P62269 152 aaKnown RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 UBE2IP63279 158 aaKnown RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 SLC10A7Q0GE19 358 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 PRKD1Q15139 912 aaPredicted RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 RFLNAQ6ZTI6 216 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 CDKL3Q8IVW4 592 aaPredicted RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 RASGEF1CQ8N431 466 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 RBMXL3Q8N7X1 1067 aaKnown RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 ATG4AQ8WYN0 398 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 SCAMP4Q969E2 229 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 SNRNP40Q96DI7 357 aaKnown RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 CAPZA3Q96KX2 299 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 FCRL4Q96PJ5 515 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 QKIQ96PU8 341 aaKnown RBP eCLIP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 NUDCD1Q96RS6 583 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 NAP1L3Q99457 506 aaPredicted RBP16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 PDE7BQ9NP56 450 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 HAUS2Q9NVX0 235 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 ENTPD4Q9Y227 616 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 PPIL1Q9Y3C6 166 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 TTLL3Q9Y4R7 772 aa16.31■□□□□ 0.2
TMEM50B-205ENST00000459909 ANKUB1A6NFN9 424 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 KIF2AO00139 706 aaPredicted RBP16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 PGLSO95336 258 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 TIAF1O95411 115 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 PEX11BO96011 259 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 ACP5P13686 325 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 TYRP1P17643 537 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 LPOP22079 712 aaPredicted RBP16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 ITKQ08881 620 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 TRAF2Q12933 501 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 SNX1Q13596 522 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 IL10RAQ13651 578 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 LAMB3Q13751 1172 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 PTPRRQ15256 657 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 LRRC66Q68CR7 880 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 TMEM26Q6ZUK4 368 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 IQCKQ8N0W5 287 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 FDCSPQ8NFU4 85 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 C1orf54Q8WWF1 131 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 KLHL6Q8WZ60 621 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 MAML1Q92585 1016 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 FATE1Q969F0 183 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 AGAP2Q99490 1192 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 FERMT1Q9BQL6 677 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 RMI1Q9H9A7 625 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 NOD2Q9HC29 1040 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 NT5MQ9NPB1 228 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 ASF1BQ9NVP2 202 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 RBM22Q9NW64 420 aaKnown RBP eCLIP16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 SMARCAL1Q9NZC9 954 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 SLC30A1Q9Y6M5 507 aa16.3■□□□□ 0.2
TMEM50B-205ENST00000459909 ARHGAP10A1A4S6 786 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 JCHAINP01591 159 aa16.29■□□□□ 0.2
TMEM50B-205ENST00000459909 CTPS1P17812 591 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms