RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 FOXP3Q9BZS1 431 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 PHACTR1Q9C0D0 580 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 CDV3Q9UKY7 258 aaKnown RBP13.81□□□□□ -0.2
TIMP1-205ENST00000456754 MED16Q9Y2X0 877 aa13.81□□□□□ -0.2
TIMP1-205ENST00000456754 COL5A1P20908 1838 aaPredicted RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 MGAT4DA6NG13 374 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 AP2A2O94973 939 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 AHSGP02765 367 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 RPS3P23396 243 aaKnown RBP eCLIP13.8□□□□□ -0.27e-9■■■■■ 55
TIMP1-205ENST00000456754 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 TIAL1Q01085 375 aaKnown RBP eCLIP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 MGAT5Q09328 741 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 LRP8Q14114 963 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 FRG1Q14331 258 aaKnown RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 CLCA4Q14CN2 919 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 SUZ12Q15022 739 aaKnown RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 DUS1LQ6P1R4 473 aaKnown RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 GUSBP11Q6P575 273 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 VRK3Q8IV63 474 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 OR2L2Q8NH16 312 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 GIMAP7Q8NHV1 300 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 ZDHHC1Q8WTX9 485 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 HEXDCQ8WVB3 486 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 MRRFQ96E11 262 aaKnown RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 CNDP2Q96KP4 475 aaKnown RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 LINC00615Q96LM1 132 aaPredicted RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 NRTNQ99748 197 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 CCM2Q9BSQ5 444 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 TXLNGYQ9BZA5 131 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 WWP1Q9H0M0 922 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 EPB41L4BQ9H329 900 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 COG4Q9H9E3 785 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 RABGEF1Q9UJ41 708 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 CFAP20Q9Y6A4 193 aaKnown RBP13.8□□□□□ -0.2
TIMP1-205ENST00000456754 SPEGQ15772 3267 aa13.8□□□□□ -0.2
TIMP1-205ENST00000456754 NEMP2A6NFY4 417 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 FAM159BA6NKW6 160 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 OR52A4PA6NMU1 304 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 PDZK1P1A8MUH7 402 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 TPP1O14773 563 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 LEPRP48357 1165 aaKnown RBP13.79□□□□□ -0.2
TIMP1-205ENST00000456754 CLCNKAP51800 687 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 CLDN6P56747 220 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 DMPKQ09013 629 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 BOP1Q14137 746 aaKnown RBP13.79□□□□□ -0.2
TIMP1-205ENST00000456754 KBTBD12Q3ZCT8 623 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 CCDC157Q569K6 752 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 PERM1Q5SV97 790 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 PTRHD1Q6GMV3 140 aaKnown RBP13.79□□□□□ -0.2
TIMP1-205ENST00000456754 STRA8Q7Z7C7 330 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 PIM3Q86V86 326 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 RELL1Q8IUW5 271 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 GPR156Q8NFN8 814 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 SLC37A2Q8TED4 501 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 JPH3Q8WXH2 748 aaPredicted RBP13.79□□□□□ -0.2
TIMP1-205ENST00000456754 ELMO1Q92556 727 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 UBXN4Q92575 508 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 RMDN2Q96LZ7 410 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 TTC1Q99614 292 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 FAM129AQ9BZQ8 928 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 SARS2Q9NP81 518 aaKnown RBP13.79□□□□□ -0.2
TIMP1-205ENST00000456754 INTS10Q9NVR2 710 aaKnown RBP13.79□□□□□ -0.2
TIMP1-205ENST00000456754 ZNF624Q9P2J8 865 aaPredicted RBP13.79□□□□□ -0.2
TIMP1-205ENST00000456754 FTSJ1Q9UET6 329 aa13.79□□□□□ -0.2
TIMP1-205ENST00000456754 SPTBN4Q9H254 2564 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 CPED1A4D0V7 1026 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 LDOC1O95751 146 aaPredicted RBP13.78□□□□□ -0.2
TIMP1-205ENST00000456754 OR56A5P0C7T3 313 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 PKMP14618 531 aaKnown RBP13.78□□□□□ -0.2
TIMP1-205ENST00000456754 KCNA4P22459 653 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 TNFRSF8P28908 595 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 CDKN2DP55273 166 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 METRNLQ641Q3 311 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 ZCCHC8Q6NZY4 707 aaKnown RBP13.78□□□□□ -0.2
TIMP1-205ENST00000456754 OGFOD3Q6PK18 319 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 ARL14Q8N4G2 192 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 PPM1NQ8N819 430 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 SIDT2Q8NBJ9 832 aaKnown RBP13.78□□□□□ -0.2
TIMP1-205ENST00000456754 HM13Q8TCT9 377 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 CALML6Q8TD86 181 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 ZNF514Q96K75 400 aaPredicted RBP13.78□□□□□ -0.2
TIMP1-205ENST00000456754 INSM2Q96T92 566 aaPredicted RBP13.78□□□□□ -0.2
TIMP1-205ENST00000456754 TCF12Q99081 682 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 OLFM1Q99784 485 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 MCMBPQ9BTE3 642 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 PARD6BQ9BYG5 372 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 TOR4AQ9NXH8 423 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 ZFATQ9P243 1243 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 GNPTGQ9UJJ9 305 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 RUVBL2Q9Y230 463 aaKnown RBP13.78□□□□□ -0.2
TIMP1-205ENST00000456754 CDYLQ9Y232 598 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 DNMT3AQ9Y6K1 912 aaPredicted RBP13.78□□□□□ -0.2
TIMP1-205ENST00000456754 RNF215Q9Y6U7 377 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 SPTBN2O15020 2390 aa13.78□□□□□ -0.2
TIMP1-205ENST00000456754 SLC5A10A0PJK1 596 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 PPM1DO15297 605 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 FTH1P02794 183 aa13.77□□□□□ -0.21
TIMP1-205ENST00000456754 ALPPL2P10696 532 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms