RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 SNX1Q13596 522 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 SPARCL1Q14515 664 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 PTPRCAPQ14761 206 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 CHRNA6Q15825 494 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 LDLRAP1Q5SW96 308 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 BORAQ6PGQ7 559 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 LINC00523Q86TU6 105 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 TRAPPC5Q8IUR0 188 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 C1orf54Q8WWF1 131 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 ATG4AQ8WYN0 398 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 C9orf72Q96LT7 481 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.69□□□□□ -0.38
TREX1-203ENST00000456089 UGT1A7Q9HAW7 530 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 UGT1A10Q9HAW8 530 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 UGT1A8Q9HAW9 530 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 IL26Q9NPH9 171 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 FBXO8Q9NRD0 319 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 GEMIN8Q9NWZ8 242 aaKnown RBP12.69□□□□□ -0.38
TREX1-203ENST00000456089 SIDT1Q9NXL6 827 aaKnown RBP12.69□□□□□ -0.38
TREX1-203ENST00000456089 WDR37Q9Y2I8 494 aa12.69□□□□□ -0.38
TREX1-203ENST00000456089 PRR19A6NJB7 356 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 ZNF891A8MT65 544 aaPredicted RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 TERTO14746 1132 aaKnown RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 POLR1CO15160 346 aaPredicted RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 CAPN5O15484 640 aaPredicted RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 SUV39H1O43463 412 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 LIASO43766 372 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 CEP104O60308 925 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 RASSF9O75901 435 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 MSH3P20585 1137 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 F8A1P23610 371 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 OAS2P29728 719 aaKnown RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 PBLDP30039 288 aaPredicted RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 AKT1P31749 480 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 ADRA1AP35348 466 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 HADHAP40939 763 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 CLCNKAP51800 687 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 CTSCP53634 463 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 GDF10P55107 478 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 TMEM115Q12893 351 aaPredicted RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 OLIG2Q13516 323 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 SEPT6Q14141 434 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 GPR18Q14330 331 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 C16orf46Q6P387 395 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 FAM92BQ6ZTR7 304 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 GSTA5Q7RTV2 222 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 C11orf96Q7Z7L8 435 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 PLXDC1Q8IUK5 500 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 TAB3Q8N5C8 712 aaPredicted RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 AVL9Q8NBF6 648 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 OR4K2Q8NGD2 314 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 GPR150Q8NGU9 434 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 ZNF398Q8TD17 642 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 DTX3LQ8TDB6 740 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 TEFMQ96QE5 360 aaKnown RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 GORASP1Q9BQQ3 440 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 TIMM29Q9BSF4 260 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 SLC25A18Q9H1K4 315 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 ZNF71Q9NQZ8 489 aaPredicted RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 PSMD13Q9UNM6 376 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 TMEM184BQ9Y519 407 aaPredicted RBP12.68□□□□□ -0.38
TREX1-203ENST00000456089 SPTA1P02549 2419 aa12.68□□□□□ -0.38
TREX1-203ENST00000456089 OR2AG2A6NM03 316 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 PRAMEF1O95521 474 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 METTL18O95568 372 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 DLGAP3O95886 979 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 FGGP02679 453 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 C9P02748 559 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 RALBP11234 206 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 MSNP26038 577 aaKnown RBP12.67□□□□□ -0.38
TREX1-203ENST00000456089 MAP4P27816 1152 aaKnown RBP12.67□□□□□ -0.38
TREX1-203ENST00000456089 FDFT1P37268 417 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 TMPRSS15P98073 1019 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 CDC20Q12834 499 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 KCNAB2Q13303 367 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 LONRF2Q1L5Z9 754 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 DEFB109BQ30KR1 87 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 IRGCQ6NXR0 463 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 XKR5Q6UX68 686 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 PPP1R21Q6ZMI0 780 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 ATG14Q6ZNE5 492 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 FAM83HQ6ZRV2 1179 aaPredicted RBP12.67□□□□□ -0.38
TREX1-203ENST00000456089 MICALCLQ6ZW33 695 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 RASGEF1AQ8N9B8 481 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 DNAAF3Q8N9W5 541 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 GALNT6Q8NCL4 622 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 STARD8Q92502 1023 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 KIAA1143Q96AT1 154 aaPredicted RBP12.67□□□□□ -0.38
TREX1-203ENST00000456089 CXorf40BQ96DE9 158 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 DCUN1D1Q96GG9 259 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 SLC45A3Q96JT2 553 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 OR6C1Q96RD1 312 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 ULBP3Q9BZM4 244 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 ASB8Q9H765 288 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 HOMER3Q9NSC5 361 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 FAM8A1Q9UBU6 413 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 CRLS1Q9UJA2 301 aa12.67□□□□□ -0.38
TREX1-203ENST00000456089 ZKSCAN5Q9Y2L8 839 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms