RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 DTLQ9NZJ0 730 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CNOT6Q9ULM6 557 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 CAPN11Q9UMQ6 739 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PPIL1Q9Y3C6 166 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 B3GALT1Q9Y5Z6 326 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 OAS3Q9Y6K5 1087 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 TNRC6AQ8NDV7 1962 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 PIKFYVEQ9Y2I7 2098 aa4.65□□□□□ -1.67
GTF3C3-208ENST00000455546 IGHV1OR21-1A0A087WYE8 117 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 A0A1W2PQ67 120 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 A0A1W2PQJ5 194 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 EFCAB7A8K855 629 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 FADS2P1A8MWK0 482 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 ANKRD66B4E2M5 251 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 KCNK1O00180 336 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 PSMD11O00231 422 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 MATN3O15232 486 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 DYRK3O43781 588 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 GYPCP04921 128 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 HLA-DQB2P05538 268 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 IVLP07476 585 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 MMP2P08253 660 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 PIRTP0C851 137 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 LIPCP11150 499 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 ACP5P13686 325 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 TNNT1P13805 278 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 ITGB6P18564 788 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 KDELR1P24390 212 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 CCNCP24863 283 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 CSF2RBP32927 897 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SERPINB6P35237 376 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 UGT1A3P35503 534 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 CD86P42081 329 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 KIR3DL1P43629 444 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 MAPK9P45984 424 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF135P52742 658 aaPredicted RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 STC1P52823 247 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 LIMK2P53671 638 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 ZBED6P86452 979 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 DPTQ07507 201 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 GALNT2Q10471 571 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 GALNT3Q14435 633 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 MESDQ14696 234 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NR1D2Q14995 579 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 CLCA4Q14CN2 919 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 PAFAH1B3Q15102 231 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 LLGL1Q15334 1064 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SF1Q15637 639 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 IFI16Q16666 785 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 HADHQ16836 314 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NKPD1Q17RQ9 610 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 FIGNQ5HY92 759 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 RALGPS1Q5JS13 557 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM209AQ5JX71 171 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 COLEC12Q5KU26 742 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NKAPLQ5M9Q1 402 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 ANKS6Q68DC2 871 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 TMEM71Q6P5X7 295 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NPNTQ6UXI9 565 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 USP45Q70EL2 814 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM129CQ86XR2 697 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NRSN1Q8IZ57 195 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 UNC5BQ8IZJ1 945 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NDUFAF2Q8N183 169 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 CNTD1Q8N815 330 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NIPA2Q8N8Q9 360 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 CCNYQ8ND76 341 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 BVESQ8NE79 360 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 EXD1Q8NHP7 514 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF564Q8TBZ8 553 aaPredicted RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM71BQ8TC56 605 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC37A2Q8TED4 501 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NCSTNQ92542 709 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 MAML1Q92585 1016 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SYN2Q92777 582 aaPredicted RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SGF29Q96ES7 293 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 AHCYL2Q96HN2 611 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 OR2M4Q96R27 311 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 TAAR9Q96RI9 348 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 MCCC1Q96RQ3 725 aaPredicted RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC38A3Q99624 504 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC12A9Q9BXP2 914 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 TDRD1Q9BXT4 1180 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 POLR1EQ9GZS1 481 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 BRD8Q9H0E9 1235 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 EPN3Q9H201 632 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 PCDH9Q9HC56 1237 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 PRDM8Q9NQV8 689 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC39A1Q9NY26 324 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SEPT10Q9P0V9 454 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 IFNKQ9P0W0 207 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 CTTNBP2NLQ9P2B4 639 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 TBC1D29Q9UFV1 150 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 SHOC2Q9UQ13 582 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 KCNK6Q9Y257 313 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 GPR55Q9Y2T6 319 aaPredicted RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 LUC7L2Q9Y383 392 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 HYOU1Q9Y4L1 999 aa4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 BZW2Q9Y6E2 419 aaKnown RBP4.64□□□□□ -1.67
GTF3C3-208ENST00000455546 NBASA2RRP1 2371 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms