RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 HIST1H2AJQ99878 128 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 HEPHQ9BQS7 1158 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 DDA1Q9BW61 102 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 MIS12Q9H081 205 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 SYNDIG1Q9H7V2 258 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 RDH14Q9HBH5 336 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 POPDC2Q9HBU9 364 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 PRDM8Q9NQV8 689 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 MBNL1Q9NR56 388 aaKnown RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 ING3Q9NXR8 418 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 H2AFY2Q9P0M6 372 aaPredicted RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 PDP2Q9P2J9 529 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 ZNF212Q9UDV6 495 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 VPS28Q9UK41 221 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 VPS4AQ9UN37 437 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 GPR34Q9UPC5 381 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 SMC3Q9UQE7 1217 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 TP53TG5Q9Y2B4 290 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 FRMD4BQ9Y2L6 1034 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 DAAM1Q9Y4D1 1078 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.7□□□□□ -1.82
RBM39-220ENST00000455343 DGKBQ9Y6T7 804 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 ITPR3Q14573 2671 aa3.7□□□□□ -1.82
RBM39-220ENST00000455343 APCP25054 2843 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 IGLV3-10A0A075B6K4 115 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 A0A0D9SEW6 157 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 IGHV5-10-1A0A0J9YXX1 117 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 LOC101059948A0A1B0GTJ6 334 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 A1L4Q6 167 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 DRGXA6NNA5 263 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 C16orf96A6NNT2 1141 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 TMEM110-MUSTN1A8MSY1 372 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 B4E171 279 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 POLR2DO15514 142 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 CALUO43852 315 aaPredicted RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 TM7SF2O76062 418 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CNTN5O94779 1100 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 SORBS2O94875 1100 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 ASMTLO95671 621 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 LDLRP01130 860 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 THRAP10827 490 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 SLC2A3P11169 496 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 KRT13P13646 458 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CTSEP14091 401 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 HK1P19367 917 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 NR1D1P20393 614 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 SYT1P21579 422 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 NR2F2P24468 414 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CD40P25942 277 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CD1CP29017 333 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 ADRA1BP35368 520 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 PSMC2P35998 433 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 TSPAN7P41732 249 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 SERPINH1P50454 418 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 CCNHP51946 323 aaPredicted RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 LIMK2P53671 638 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 SRP54P61011 504 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 YWHAZP63104 245 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 NUCB2P80303 420 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 MC1RQ01726 317 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 SLC20A2Q08357 652 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 MTA1Q13330 715 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 TRA2AQ13595 282 aaKnown RBP eCLIP3.69□□□□□ -1.823e-11■■■■□ 19.4
RBM39-220ENST00000455343 CUL4AQ13619 759 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 NFATC4Q14934 902 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 MEA1Q16626 185 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 DEFB109BQ30KR1 87 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CBWD6Q4V339 395 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 C14orf28Q4W4Y0 310 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 ZCWPW2Q504Y3 356 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 ALFQ53S48 1182 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 ZNF805Q5CZA5 627 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CARD16Q5EG05 197 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CBWD3Q5JTY5 395 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CBWD5Q5RIA9 395 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 MBNL2Q5VZF2 373 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 C22orf39Q6P5X5 142 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 LINGO4Q6UY18 593 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 TIPARPQ7Z3E1 657 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 HEATR4Q86WZ0 1026 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CXorf67Q86X51 503 aaPredicted RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 FAM114A1Q8IWE2 563 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 CCDC13Q8IYE1 715 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 FAM186BQ8IYM0 893 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 PCDH20Q8N6Y1 951 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 ATP6V0D2Q8N8Y2 350 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 Q8N9G6 341 aaPredicted RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 NLGN4YQ8NFZ3 816 aaPredicted RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 CPT1CQ8TCG5 803 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 PROKR1Q8TCW9 393 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 TSACCQ96A04 125 aaPredicted RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 FUBP1Q96AE4 644 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 ISG20Q96AZ6 181 aaKnown RBP3.69□□□□□ -1.82
RBM39-220ENST00000455343 FAM149B1Q96BN6 582 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 ARHGEF26Q96DR7 871 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 RTP4Q96DX8 246 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 SLC2A13Q96QE2 648 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 NUDT22Q9BRQ3 303 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 EFHD1Q9BUP0 239 aa3.69□□□□□ -1.82
RBM39-220ENST00000455343 TRIM62Q9BVG3 475 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms