RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 THNSL2Q86YJ6 484 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 CHERPQ8IWX8 916 aaKnown RBP5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 KIAA0895Q8NCT3 520 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 OR2W6PQ8NHA6 318 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 RUFY2Q8WXA3 655 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 SHC3Q92529 594 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 NCSTNQ92542 709 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 WASF1Q92558 559 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 CCDC127Q96BQ5 260 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 WDR92Q96MX6 357 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 FCRL4Q96PJ5 515 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 SLC38A3Q99624 504 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 FEM1AQ9BSK4 669 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 YIPF4Q9BSR8 244 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 MMTAG2Q9BU76 263 aaKnown RBP5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 STRA6Q9BX79 667 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 NLNQ9BYT8 704 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 AGXT2Q9BYV1 514 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 SDCBP2Q9H190 292 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 CHST8Q9H2A9 424 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 DYRK4Q9NR20 520 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 RBAKQ9NYW8 714 aaPredicted RBP5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 LARSQ9P2J5 1176 aaKnown RBP5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 HS3ST2Q9Y278 367 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 ATP23Q9Y6H3 246 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 TENM2Q9NT68 2774 aa5.16□□□□□ -1.58
SBDSP1-204ENST00000453858 CHD5Q8TDI0 1954 aa5.15□□□□□ -1.58
SBDSP1-204ENST00000453858 MYOCOSA0A1B0GUC4 107 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 ANKRD62A6NC57 917 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 E9PLN8 166 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 PRAMEF2O60811 474 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 EIF5BO60841 1220 aaKnown RBP5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 AMY2AP04746 511 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 HOXC4P09017 264 aaPredicted RBP5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 TMEM253P0C7T8 217 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 FAM200BP0CF97 657 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 BRAFP15056 766 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 GSPT1P15170 499 aaKnown RBP5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 PDGFRAP16234 1089 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 AMY2BP19961 511 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 IL4RP24394 825 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 HTR1BP28222 390 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 CASP6P55212 293 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 JAM2P57087 298 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 DCAF7P61962 342 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 YWHAGP61981 247 aaKnown RBP eCLIP5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 GPS2Q13227 327 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 KLHL40Q2TBA0 621 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 CT47A1Q5JQC4 288 aaPredicted RBP5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 RAB41Q5JT25 222 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 PRR31Q5SQ13 230 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 DPY19L3Q6ZPD9 716 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 TRAPPC11Q7Z392 1133 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 MRGPREQ86SM8 312 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 SKAP1Q86WV1 359 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 DOLPP1Q86YN1 238 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 ZZZ3Q8IYH5 903 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 LRRC75A-AS1Q8N1F1 130 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 PPM1NQ8N819 430 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 C4orf32Q8N8J7 132 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 ENDOVQ8N8Q3 282 aaKnown RBP5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 OR56A4Q8NGH8 313 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 OR10G6Q8NH81 332 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 MZB1Q8WU39 189 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 POMGNT1Q8WZA1 660 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 RAB7BQ96AH8 199 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 TNIP3Q96KP6 325 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 C9orf72Q96LT7 481 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 VKORC1Q9BQB6 163 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 ST6GALNAC4Q9H4F1 302 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 ZHX3Q9H4I2 956 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 SMYD3Q9H7B4 428 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 CNTD2Q9H8S5 307 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 SMURF1Q9HCE7 757 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 ANLNQ9NQW6 1124 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 DTLQ9NZJ0 730 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 IL36AQ9UHA7 158 aa5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 NAP1L2Q9ULW6 460 aaPredicted RBP5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 LUC7L2Q9Y383 392 aaKnown RBP5.15□□□□□ -1.59
SBDSP1-204ENST00000453858 A6NNC1 897 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 C16orf96A6NNT2 1141 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 RASA4BC9J798 803 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 TOX3O15405 576 aaPredicted RBP5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 RASA4O43374 803 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 KLF7O75840 302 aaPredicted RBP5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 ZRANB2O95218 330 aaKnown RBP eCLIP5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 MED14OSP0DP75 135 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 CPA1P15085 419 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 FAHP16930 419 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 BMP7P18075 431 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 KRT15P19012 456 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 AK4P27144 223 aaPredicted RBP5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 TRIM23P36406 574 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 SLC11A2P49281 568 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 GFERP55789 205 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 CCT2P78371 535 aaKnown RBP5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 POSTNQ15063 836 aa5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 PCBP2Q15366 365 aaKnown RBP eCLIP5.14□□□□□ -1.59
SBDSP1-204ENST00000453858 CHRFAM7AQ494W8 412 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms