RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 XRCC4Q13426 336 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 IL10RAQ13651 578 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 ASTE1Q2TB18 679 aaPredicted RBP11.42□□□□□ -0.58
GARNL3-210ENST00000453030 LDLRAP1Q5SW96 308 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 GPRC6AQ5T6X5 926 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 KLHL35Q6PF15 583 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 TMEM220Q6QAJ8 160 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 KDELC1Q6UW63 502 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 BEND7Q8N7W2 519 aaPredicted RBP11.42□□□□□ -0.58
GARNL3-210ENST00000453030 DDHD1Q8NEL9 900 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 IPMKQ8NFU5 416 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 BRSK1Q8TDC3 778 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 TFB1MQ8WVM0 346 aaKnown RBP11.42□□□□□ -0.58
GARNL3-210ENST00000453030 HAUS1Q96CS2 278 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 ZNF514Q96K75 400 aaPredicted RBP11.42□□□□□ -0.58
GARNL3-210ENST00000453030 RAB33BQ9H082 229 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 TRABDQ9H4I3 376 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 FGF21Q9NSA1 209 aa11.42□□□□□ -0.58
GARNL3-210ENST00000453030 CENPEQ02224 2701 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 SSU72P8A0A1W2PR75 194 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 UBA6A0AVT1 1052 aaPredicted RBP11.41□□□□□ -0.58
GARNL3-210ENST00000453030 OR5K3A6NET4 321 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 ARGFXA6NJG6 315 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 DDX3YO15523 660 aaKnown RBP11.41□□□□□ -0.58
GARNL3-210ENST00000453030 SPOPO43791 374 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 CST8O60676 142 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 CPNE3O75131 537 aaKnown RBP11.41□□□□□ -0.58
GARNL3-210ENST00000453030 TPM3P06753 285 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 PTPN4P29074 926 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 ARHGAP25P42331 645 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 ACY1Q03154 408 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 SEMA5AQ13591 1074 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 GPR19Q15760 415 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 FNBP1LQ5T0N5 605 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 FBXO38Q6PIJ6 1188 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 ZC3H18Q86VM9 953 aaKnown RBP11.41□□□□□ -0.58
GARNL3-210ENST00000453030 OOSP2Q86WS3 158 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 TMEM126BQ8IUX1 230 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 APLFQ8IW19 511 aaPredicted RBP11.41□□□□□ -0.58
GARNL3-210ENST00000453030 RHOT2Q8IXI1 618 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 RHOT1Q8IXI2 618 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 EFCAB3Q8N7B9 438 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 OXNAD1Q96HP4 312 aaPredicted RBP11.41□□□□□ -0.58
GARNL3-210ENST00000453030 MRGPRX2Q96LB1 330 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 C12orf66Q96MD2 445 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 DNAJC7Q99615 494 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 WWP1Q9H0M0 922 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 HRASLS2Q9NWW9 162 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 SOHLH2Q9NX45 425 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 DDX56Q9NY93 547 aaKnown RBP11.41□□□□□ -0.58
GARNL3-210ENST00000453030 IL17CQ9P0M4 197 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 SEMA5BQ9P283 1151 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 PKP3Q9Y446 797 aa11.41□□□□□ -0.58
GARNL3-210ENST00000453030 LOC285095A0A1B0GVY8 99 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 TTLL8A6PVC2 850 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 GAPDHSO14556 408 aaPredicted RBP11.4□□□□□ -0.58
GARNL3-210ENST00000453030 SCRG1O75711 98 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 PRAMEF1O95521 474 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 MSH3P20585 1137 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 COMTP21964 271 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 CDKN2BP42772 138 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 PGDP52209 483 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 RPS15P62841 145 aaKnown RBP11.4□□□□□ -0.58
GARNL3-210ENST00000453030 GPS2Q13227 327 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 ITGA9Q13797 1035 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 PTPRCAPQ14761 206 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 SLC1A5Q15758 541 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 UGT8Q16880 541 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 LONRF2Q1L5Z9 754 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 LRRC38Q5VT99 294 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 ZDHHC20Q5W0Z9 365 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 HIST2H2BCQ6DN03 193 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 SYVN1Q86TM6 617 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 ZNF567Q8N184 647 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 SPDYE1Q8NFV5 336 aaPredicted RBP11.4□□□□□ -0.58
GARNL3-210ENST00000453030 OR8K1Q8NGG5 319 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 MR1Q95460 341 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 PPM1MQ96MI6 270 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 CD180Q99467 661 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 CHP1Q99653 195 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 ANP32EQ9BTT0 268 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 SLC25A23Q9BV35 468 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 FSD1LQ9BXM9 530 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 TLR10Q9BXR5 811 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 GOLPH3Q9H4A6 298 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 ABHD10Q9NUJ1 306 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 ZNHIT6Q9NWK9 470 aaKnown RBP11.4□□□□□ -0.58
GARNL3-210ENST00000453030 HACD3Q9P035 362 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 RSPH14Q9UHP6 348 aa11.4□□□□□ -0.58
GARNL3-210ENST00000453030 OR6C74A6NCV1 312 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 STX7O15400 261 aaKnown RBP11.39□□□□□ -0.59
GARNL3-210ENST00000453030 KCNJ13O60928 360 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 VPS4BO75351 444 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 AGFG2O95081 481 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 SLC35G4P0C7Q5 338 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 HLA-DPA1P20036 260 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 GNLYP22749 145 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 SLC1A1P43005 524 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 PTGIRP43119 386 aa11.39□□□□□ -0.59
GARNL3-210ENST00000453030 NR2C2P49116 596 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms