RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SH3BP5O60239 455 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 TRIM16O95361 564 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 FTH1P02794 183 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 PKMP14618 531 aaKnown RBP23.62■■□□□ 1.37
CPSF4-207ENST00000451876 RPL10P27635 214 aaKnown RBP23.62■■□□□ 1.37
CPSF4-207ENST00000451876 PHBP35232 272 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 GRK6P43250 576 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 CLCNKAP51800 687 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 SEPT7Q16181 437 aaKnown RBP23.62■■□□□ 1.37
CPSF4-207ENST00000451876 C6orf132Q5T0Z8 1188 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 STRA8Q7Z7C7 330 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 SLC26A11Q86WA9 606 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 NAXDQ8IW45 347 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 CTAGE3PQ8IX95 158 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 UHMK1Q8TAS1 419 aaKnown RBP23.62■■□□□ 1.37
CPSF4-207ENST00000451876 SETD7Q8WTS6 366 aaKnown RBP23.62■■□□□ 1.37
CPSF4-207ENST00000451876 ATXN7L3BQ96GX2 97 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 NDNQ99608 321 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 FUT8Q9BYC5 575 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 EPB41L4BQ9H329 900 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 DPEP2Q9H4A9 486 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 PRDM8Q9NQV8 689 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 SIRPGQ9P1W8 387 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 RAB21Q9UL25 225 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 MED16Q9Y2X0 877 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 A6NCN8 305 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 B4DGG1 531 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 RIPK2O43353 540 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 SIGLEC6O43699 453 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 SNX2O60749 519 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 VCLP18206 1134 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 CCR7P32248 378 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 BOP1Q14137 746 aaKnown RBP23.61■■□□□ 1.37
CPSF4-207ENST00000451876 RBM20Q5T481 1227 aaKnown RBP23.61■■□□□ 1.37
CPSF4-207ENST00000451876 LVRNQ6Q4G3 990 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 TRMT10CQ7L0Y3 403 aaKnown RBP23.61■■□□□ 1.37
CPSF4-207ENST00000451876 SPNS2Q8IVW8 549 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 HM13Q8TCT9 377 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 NETO1Q8TDF5 533 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 AENQ8WTP8 325 aaKnown RBP23.61■■□□□ 1.37
CPSF4-207ENST00000451876 PATE1Q8WXA2 126 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 ELMO1Q92556 727 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 MCMBPQ9BTE3 642 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 ACSS3Q9H6R3 686 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 COG4Q9H9E3 785 aa23.61■■□□□ 1.37
CPSF4-207ENST00000451876 C17orf113A0A1B0GUU1 675 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 CD151P48509 253 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 CFAP206Q8IYR0 622 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 NAGSQ8N159 534 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 PPM1NQ8N819 430 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 DUSP23Q9BVJ7 150 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 GALPQ9UBC7 116 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 PCOLCE2Q9UKZ9 415 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 WDR37Q9Y2I8 494 aa23.6■■□□□ 1.37
CPSF4-207ENST00000451876 ALPPL2P10696 532 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 MYF5P13349 255 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 BRAFP15056 766 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 BRD3Q15059 726 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 METRNLQ641Q3 311 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 ZCCHC8Q6NZY4 707 aaKnown RBP23.59■■□□□ 1.37
CPSF4-207ENST00000451876 ZC3HC1Q86WB0 502 aaKnown RBP23.59■■□□□ 1.37
CPSF4-207ENST00000451876 RHBDD1Q8TEB9 315 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 ZDHHC1Q8WTX9 485 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 AARSD1Q9BTE6 412 aaKnown RBP23.59■■□□□ 1.37
CPSF4-207ENST00000451876 NSMCE4AQ9NXX6 385 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 SCHIP1Q9P0W5 487 aaPredicted RBP23.59■■□□□ 1.37
CPSF4-207ENST00000451876 PSMD13Q9UNM6 376 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 DCHS1Q96JQ0 3298 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 KLHL33A6NCF5 533 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 NOBOXO60393 691 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 KCNJ13O60928 360 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 CBFA2T3O75081 653 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 FAM155BO75949 473 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 IDSP22304 550 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 MCM3P25205 808 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 PREPP48147 710 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 CSE1LP55060 971 aaKnown RBP23.59■■□□□ 1.37
CPSF4-207ENST00000451876 INAVAQ3KP66 663 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 SLC35F3Q8IY50 421 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 KYQ8NBH2 561 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 ACVR1CQ8NER5 493 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 BAHD1Q8TBE0 780 aaPredicted RBP23.59■■□□□ 1.37
CPSF4-207ENST00000451876 APOLD1Q96LR9 279 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 PANX3Q96QZ0 392 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 CCDC68Q9H2F9 335 aa23.59■■□□□ 1.37
CPSF4-207ENST00000451876 SARS2Q9NP81 518 aaKnown RBP23.59■■□□□ 1.37
CPSF4-207ENST00000451876 LY6G6EA0A0G2JKS1 128 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 PDZK1P1A8MUH7 402 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 H3BMM5 538 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 GSTM1P09488 218 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 F3P13726 295 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 CHRM3P20309 590 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 PDHA2P29803 388 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 GSTM4Q03013 218 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 PIP4P1Q86T03 277 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 SPDYE1Q8NFV5 336 aaPredicted RBP23.58■■□□□ 1.36
CPSF4-207ENST00000451876 MRRFQ96E11 262 aaKnown RBP23.58■■□□□ 1.36
CPSF4-207ENST00000451876 CYTH2Q99418 400 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 SLC30A3Q99726 388 aa23.58■■□□□ 1.36
CPSF4-207ENST00000451876 CPNE1Q99829 537 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms