RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GSE1Q14687 1217 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 BRD3Q15059 726 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 OASLQ15646 514 aaKnown RBP9.48□□□□□ -0.89
USP54-207ENST00000451492 RPE65Q16518 533 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 AGAP9Q5VTM2 703 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 ABRAXAS1Q6UWZ7 409 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 ARHGAP22Q7Z5H3 698 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 SNX20Q7Z614 316 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 SERPINA9Q86WD7 417 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 PLXDC1Q8IUK5 500 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 LRRC8AQ8IWT6 810 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 CFAP206Q8IYR0 622 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 BMPERQ8N8U9 685 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 CCDC89Q8N998 374 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 GLIS1Q8NBF1 620 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 SPDYE1Q8NFV5 336 aaPredicted RBP9.48□□□□□ -0.89
USP54-207ENST00000451492 ULK4Q96C45 1275 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 C9orf72Q96LT7 481 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 ETNK1Q9HBU6 452 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 SLC40A1Q9NP59 571 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 RAB6BQ9NRW1 208 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 ACSL6Q9UKU0 697 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 MGAT4DA6NG13 374 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 ERVH48-1M5A8F1 160 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 NRDCO43847 1150 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 RAD1O60671 282 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 MTHFD1P11586 935 aaKnown RBP9.47□□□□□ -0.89
USP54-207ENST00000451492 ATP1B2P14415 290 aaPredicted RBP9.47□□□□□ -0.89
USP54-207ENST00000451492 LIFP15018 202 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 WT1P19544 449 aaPredicted RBP9.47□□□□□ -0.89
USP54-207ENST00000451492 MSNP26038 577 aaKnown RBP9.47□□□□□ -0.89
USP54-207ENST00000451492 ACRV1P26436 265 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 CD82P27701 267 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 GRIA1P42261 906 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 PREPP48147 710 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 RAB15P59190 212 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 BASP1P80723 227 aaKnown RBP9.47□□□□□ -0.89
USP54-207ENST00000451492 RHDQ02161 417 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 DMPKQ09013 629 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 CDH17Q12864 832 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 KRT33BQ14525 404 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 CACHD1Q5VU97 1274 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 PCSK4Q6UW60 755 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 CEACAM20Q6UY09 585 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 NAPRTQ6XQN6 538 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 GSTA5Q7RTV2 222 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 RASGRP3Q8IV61 690 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 UNC5BQ8IZJ1 945 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 CACNA2D3Q8IZS8 1091 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 OR2L2Q8NH16 312 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 DTX3LQ8TDB6 740 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 RTP4Q96DX8 246 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 RMDN2Q96LZ7 410 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 OR6C1Q96RD1 312 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 INSM2Q96T92 566 aaPredicted RBP9.47□□□□□ -0.89
USP54-207ENST00000451492 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 DDA1Q9BW61 102 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 EPB41L1Q9H4G0 881 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 UCK1Q9HA47 277 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 ARNT2Q9HBZ2 717 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 NLE1Q9NVX2 485 aaPredicted RBP9.47□□□□□ -0.89
USP54-207ENST00000451492 SMARCAL1Q9NZC9 954 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 FEZ2Q9UHY8 353 aaPredicted RBP9.47□□□□□ -0.89
USP54-207ENST00000451492 PCDHGA4Q9Y5G9 962 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 KALRNO60229 2985 aa9.47□□□□□ -0.89
USP54-207ENST00000451492 B4E171 279 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 POLR1CO15160 346 aaPredicted RBP9.46□□□□□ -0.9
USP54-207ENST00000451492 PSMD3O43242 534 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 SGTAO43765 313 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 CEP104O60308 925 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 C1QL1O75973 258 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 STK17BO94768 372 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 GAS8O95995 478 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 FGGP02679 453 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 C9P02748 559 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 APRTP07741 180 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 FDFT1P37268 417 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 TSPAN7P41732 249 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 KCNJ1P48048 391 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 PRLHRP49683 370 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 CSE1LP55060 971 aaKnown RBP9.46□□□□□ -0.9
USP54-207ENST00000451492 MC2RQ01718 297 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 KCNAB1Q14722 419 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 DBN1Q16643 649 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 BCL7AQ4VC05 210 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 METRNLQ641Q3 311 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 XKR5Q6UX68 686 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 WASH2PQ6VEQ5 465 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 LINC00523Q86TU6 105 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 DTX1Q86Y01 620 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 RBM12BQ8IXT5 1001 aaKnown RBP9.46□□□□□ -0.9
USP54-207ENST00000451492 KLHDC8BQ8IXV7 354 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 PIANPQ8IYJ0 282 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 CLDN19Q8N6F1 224 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 ZSCAN1Q8NBB4 408 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 HM13Q8TCT9 377 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 STYXQ8WUJ0 223 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 TTC9Q92623 222 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 EXTL1Q92935 676 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms