RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 PTPN7P35236 360 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 CASRP41180 1078 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 POLE2P56282 527 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 RWDD2BP57060 319 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 XIAPP98170 497 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 FOXM1Q08050 763 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 ITGA9Q13797 1035 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 SPARCL1Q14515 664 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 TAF1AQ15573 450 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 RPE65Q16518 533 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 DENND5AQ6IQ26 1287 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 DARS2Q6PI48 645 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 FAM92BQ6ZTR7 304 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 DET1Q7L5Y6 550 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 GAS2L3Q86XJ1 694 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 CDKL3Q8IVW4 592 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 OR13C4Q8NGS5 318 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 CCDC110Q8TBZ0 833 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 ZPBPQ9BS86 351 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 SMOXQ9NWM0 555 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 FKBPLQ9UIM3 349 aa16.09■□□□□ 0.17
RPUSD3-209ENST00000451405 NOTCH2Q04721 2471 aa16.08■□□□□ 0.17
RPUSD3-209ENST00000451405 ZNF106Q9H2Y7 1883 aaKnown RBP16.08■□□□□ 0.17
RPUSD3-209ENST00000451405 UNC79Q9P2D8 2635 aa16.08■□□□□ 0.17
RPUSD3-209ENST00000451405 CCDC66A2RUB6 948 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 BLACEA4D250 179 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 SGTAO43765 313 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 PRAMEF1O95521 474 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 PBLDP30039 288 aaPredicted RBP16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 HALP42357 657 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 CCR10P46092 362 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 CAPZBP47756 277 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 FNBP1LQ5T0N5 605 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 CACHD1Q5VU97 1274 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 METRNLQ641Q3 311 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 ITPRIPL1Q6GPH6 555 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 RBM12BQ8IXT5 1001 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 KLHL6Q8WZ60 621 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 SLC45A3Q96JT2 553 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 CALR3Q96L12 384 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 PSMG3-AS1Q96PY0 264 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 OR6C1Q96RD1 312 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 INSM2Q96T92 566 aaPredicted RBP16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 ZNF768Q9H5H4 540 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 ASB8Q9H765 288 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 EPHA6Q9UF33 1036 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 ANAPC2Q9UJX6 822 aa16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 AAR2Q9Y312 384 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 CFAP20Q9Y6A4 193 aaKnown RBP16.08■□□□□ 0.16
RPUSD3-209ENST00000451405 C5orf60A6NFR6 353 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 C2orf81A6NN90 581 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 TOX3O15405 576 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 RASSF9O75901 435 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 SRP72O76094 671 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 MSH3P20585 1137 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 F8A1P23610 371 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 AKT1P31749 480 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 VAV2P52735 878 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 TMPRSS15P98073 1019 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 ABHD18Q0P651 414 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 IRGCQ6NXR0 463 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 TMEM139Q8IV31 216 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 ELMO2Q96JJ3 720 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 SPATA13Q96N96 652 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 ZCCHC2Q9C0B9 1178 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 FAM96AQ9H5X1 160 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 GPN2Q9H9Y4 310 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 PACSIN2Q9UNF0 486 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 MYO9AB2RTY4 2548 aa16.07■□□□□ 0.16
RPUSD3-209ENST00000451405 IGHV5-51A0A0C4DH38 117 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 MGAT4DA6NG13 374 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 ZNF891A8MT65 544 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 AGAP14A8MT82 685 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 CCL22O00626 93 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 TJP3O95049 919 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 PRPSAP1Q14558 356 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 DUS1LQ6P1R4 473 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 PRSS42Q7Z5A4 293 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 KLHDC8BQ8IXV7 354 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 LILRA3Q8N6C8 439 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 SPDYE1Q8NFV5 336 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 ZDHHC12Q96GR4 267 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 TBL1YQ9BQ87 522 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 FERMT1Q9BQL6 677 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 RAB33BQ9H082 229 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 WWP1Q9H0M0 922 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 ZNF71Q9NQZ8 489 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 FAM8A1Q9UBU6 413 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 TUBD1Q9UJT1 453 aa16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 MRPS18BQ9Y676 258 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 SPTAN1Q13813 2472 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-209ENST00000451405 CLEC18AA5D8T8 446 aa16.05■□□□□ 0.16
RPUSD3-209ENST00000451405 ENO4A6NNW6 628 aa16.05■□□□□ 0.16
RPUSD3-209ENST00000451405 DDX3YO15523 660 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-209ENST00000451405 IPO7O95373 1038 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-209ENST00000451405 METTL18O95568 372 aa16.05■□□□□ 0.16
RPUSD3-209ENST00000451405 POLBP06746 335 aa16.05■□□□□ 0.16
RPUSD3-209ENST00000451405 PRKAR1AP10644 381 aa16.05■□□□□ 0.16
RPUSD3-209ENST00000451405 NELFEP18615 380 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-209ENST00000451405 STAT5AP42229 794 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms