RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 TNKS2Q9H2K2 1166 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 MFSD1Q9H3U5 465 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 HMGXB4Q9UGU5 601 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 RWDD3Q9Y3V2 267 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 PSMD11O00231 422 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 CCL22O00626 93 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 FSTL1Q12841 308 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 ZNF460Q14592 562 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 DPY19L1Q2PZI1 675 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 CPNE9Q8IYJ1 553 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 LRRC17Q8N6Y2 441 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 PCBD2Q9H0N5 130 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 GALNT8Q9NY28 637 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 ING4Q9UNL4 249 aa13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 MRPS7Q9Y2R9 242 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3DA0A087WVF3 549 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3IA0A087WXS9 549 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3EA0A087X179 549 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3KA0A087X1G2 549 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3FA6NER0 549 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3LB9A6J9 549 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TAF4O00268 1085 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ANGPTL1O95841 491 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3HP0C7X1 549 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 RHAGQ02094 409 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3GQ6DHY5 549 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3CQ6IPX1 549 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ZNF730Q6ZMV8 503 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 OAFQ86UD1 273 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ZC3H3Q8IXZ2 948 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TBC1D3Q8IZP1 549 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 SLC43A3Q8NBI5 491 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 FLCNQ8NFG4 579 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 VANGL1Q8TAA9 524 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 FAM81AQ8TBF8 368 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 RAD51AP1Q96B01 352 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TRMT13Q9NUP7 481 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 POLR3BQ9NW08 1133 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 KLF11O14901 512 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 PGRMC2O15173 223 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 AQP1P29972 269 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 BNC1Q01954 994 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 SIM2Q14190 667 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 SF1Q15637 639 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 CLIP3Q96DZ5 547 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ATG10Q9H0Y0 220 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 CCDC162PA2VCL2 907 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 MAGEB17A8MXT2 336 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 KHDRBS3O75525 346 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ZBTB11O95625 1053 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 RAB25P57735 213 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ACTR3P61158 418 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ARHGAP1Q07960 439 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TCEAL1Q15170 157 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 LDLRAP1Q5SW96 308 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 CAPSLQ8WWF8 208 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 SLC13A3Q8WWT9 602 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TAS2R1Q9NYW7 299 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 CALML5Q9NZT1 146 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 RUVBL1Q9Y265 456 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 CXCR6O00574 342 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 SSNA1O43805 119 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 IDH3BO43837 385 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 CMPK1P30085 196 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 OMPP47874 163 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 PTGES3Q15185 160 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 DCST1Q5T197 706 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 RNF220Q5VTB9 566 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 SNX20Q7Z614 316 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 ZZZ3Q8IYH5 903 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 SLC22A17Q8WUG5 538 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 WBP11Q9Y2W2 641 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 LOC110117498-PIK3R3F6TDL0 507 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 PEX10O60683 326 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 PSMD8P48556 350 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 CCNIQ14094 377 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 HKDC1Q2TB90 917 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 TMEM27Q9HBJ8 222 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 PCDHGA11Q9Y5H2 935 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 CPQQ9Y646 472 aa13.05□□□□□ -0.32
SMARCA4-205ENST00000450717 SAGE2PA6NJ88 616 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 CASKO14936 926 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 UGT1A9O60656 530 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 MAPK12P53778 367 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 PTPN5P54829 565 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 SLC25A11Q02978 314 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 CPNE8Q86YQ8 564 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 SLC30A8Q8IWU4 369 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 UGT1A7Q9HAW7 530 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 UGT1A10Q9HAW8 530 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 UGT1A8Q9HAW9 530 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 TMEM88BA6NKF7 163 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 RAP2AP10114 183 aa13.04□□□□□ -0.32
SMARCA4-205ENST00000450717 RPS14P62263 151 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms