RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TRAM1L1Q8N609 369 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 SLC37A2Q8TED4 501 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 RANBP9Q96S59 729 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 ZSCAN5AQ9BUG6 496 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 PIH1D1Q9NWS0 290 aaKnown RBP16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 TBC1D29Q9UFV1 150 aa16.79■□□□□ 0.28
PRPF40A-204ENST00000450303 BUD23O43709 281 aaKnown RBP16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 NUAK1O60285 661 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 AVILO75366 819 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 ITGA2BP08514 1039 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 MPSTP25325 297 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 SLC5A2P31639 672 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 ETV5P41161 510 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 MAGEA3P43357 314 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 MAPK10P53779 464 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 DCDC1P59894 354 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 DHX9Q08211 1270 aaKnown RBP16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 CBLBQ13191 982 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 EIF3IQ13347 325 aaKnown RBP16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 SEPT6Q14141 434 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 POU6F1Q14863 301 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 NR1D2Q14995 579 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 C16orf72Q14CZ0 275 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 PLA2G4EQ3MJ16 856 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 FNBP1LQ5T0N5 605 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 BROXQ5VW32 411 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 CRTC3Q6UUV7 619 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 CLEC14AQ86T13 490 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 RCBTB1Q8NDN9 531 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 AENQ8WTP8 325 aaKnown RBP16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 GLYATL1Q969I3 302 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 RMI1Q9H9A7 625 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 TRIM39Q9HCM9 518 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 SAYSD1Q9NPB0 183 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 RAD18Q9NS91 495 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 KCNK4Q9NYG8 393 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 MAD1L1Q9Y6D9 718 aa16.78■□□□□ 0.28
PRPF40A-204ENST00000450303 IGHV1OR21-1A0A087WYE8 117 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 E7ESA3 106 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 LPOP22079 712 aaPredicted RBP16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 GPR3P46089 330 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 CFHR1Q03591 330 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 KHDC1Q4VXA5 237 aaKnown RBP16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 ARHGAP40Q5TG30 622 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 GPR155Q7Z3F1 870 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 SFRP1Q8N474 314 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 TTC30BQ8N4P2 665 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 PYROXD1Q8WU10 500 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 CAVIN3Q969G5 261 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 STAMBPL1Q96FJ0 436 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 SIGLEC10Q96LC7 697 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 RUFY1Q96T51 708 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 DPH1Q9BZG8 443 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 MRM3Q9HC36 420 aaKnown RBP16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 PRDM8Q9NQV8 689 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 KLC4Q9NSK0 619 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 SYBUQ9NX95 663 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 TMEM9Q9P0T7 183 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 SLC23A2Q9UGH3 650 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 TMPRSS11EQ9UL52 423 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 SOX13Q9UN79 622 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 PKP3Q9Y446 797 aa16.77■□□□□ 0.28
PRPF40A-204ENST00000450303 IGHV5-10-1A0A0J9YXX1 117 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 ZW10O43264 779 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 TTC4O95801 387 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 POLBP06746 335 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 PAMP19021 973 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 ECHS1P30084 290 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 MLLT3P42568 568 aaPredicted RBP16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 NFATC2Q13469 925 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 PTPRCAPQ14761 206 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 SKIDA1Q1XH10 827 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 ATP13A5Q4VNC0 1218 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 CCDC38Q502W7 563 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 IYDQ6PHW0 289 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 PHYKPLQ8IUZ5 450 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 PALM2Q8IXS6 379 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 ZBED8Q8IZ13 594 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 STYXQ8WUJ0 223 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 PEX13Q92968 403 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 USP7Q93009 1102 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 CCDC74BQ96LY2 380 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 PWWP2AQ96N64 755 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 SLC38A3Q99624 504 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 CMKLR1Q99788 373 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 EBNA1BP2Q99848 306 aaKnown RBP16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 C19orf43Q9BQ61 176 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 ZMYND15Q9H091 742 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 OSGEPL1Q9H4B0 414 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 NFKBIL1Q9UBC1 381 aaPredicted RBP16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 RIMKLBQ9ULI2 386 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 DNAJC16Q9Y2G8 782 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 TCAF1Q9Y4C2 921 aa16.76■□□□□ 0.27
PRPF40A-204ENST00000450303 PRAMEF33A0A0G2JMD5 474 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 FAM237BA0A1B0GVD1 139 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 STX7O15400 261 aaKnown RBP16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 UGT1A9O60656 530 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 PRAMEF10O60809 474 aa16.75■□□□□ 0.27
PRPF40A-204ENST00000450303 CCL4P13236 92 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms