RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 OR2L2Q8NH16 312 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 KLHL6Q8WZ60 621 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 ZNF514Q96K75 400 aaPredicted RBP12.1□□□□□ -0.47
MSH5-209ENST00000450148 TGM7Q96PF1 710 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 INSM2Q96T92 566 aaPredicted RBP12.1□□□□□ -0.47
MSH5-209ENST00000450148 ZPBPQ9BS86 351 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 FEZ2Q9UHY8 353 aaPredicted RBP12.1□□□□□ -0.47
MSH5-209ENST00000450148 PSMD13Q9UNM6 376 aa12.1□□□□□ -0.47
MSH5-209ENST00000450148 IGLV3-16A0A075B6K0 115 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 LOC101059948A0A1B0GTJ6 334 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 H7C0S8 307 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 ZNF189O75820 626 aaPredicted RBP12.09□□□□□ -0.47
MSH5-209ENST00000450148 STK17BO94768 372 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 CRTAMO95727 393 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 SPTBP11277 2137 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 MTHFD1P11586 935 aaKnown RBP12.09□□□□□ -0.47
MSH5-209ENST00000450148 ZNF28P17035 718 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 ITGB6P18564 788 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 MSH3P20585 1137 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 PSMA3P25788 255 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 PBLDP30039 288 aaPredicted RBP12.09□□□□□ -0.47
MSH5-209ENST00000450148 AKT1P31749 480 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 HALP42357 657 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 PRLHRP49683 370 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 SEPHS1P49903 392 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 CDKN1CP49918 316 aaPredicted RBP12.09□□□□□ -0.47
MSH5-209ENST00000450148 TMPRSS15P98073 1019 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 SNX20Q7Z614 316 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 NLGN4XQ8N0W4 816 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 NXPE1Q8N323 547 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
MSH5-209ENST00000450148 NLGN4YQ8NFZ3 816 aaPredicted RBP12.09□□□□□ -0.47
MSH5-209ENST00000450148 DNAJC1Q96KC8 554 aaKnown RBP12.09□□□□□ -0.47
MSH5-209ENST00000450148 PPP1R2P1Q96PQ5 205 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 TMEM121Q9BTD3 319 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 WWP1Q9H0M0 922 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 FAM96AQ9H5X1 160 aa12.09□□□□□ -0.47
MSH5-209ENST00000450148 CFAP20Q9Y6A4 193 aaKnown RBP12.09□□□□□ -0.47
MSH5-209ENST00000450148 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 B8ZZF3 427 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 POLR1CO15160 346 aaPredicted RBP12.08□□□□□ -0.48
MSH5-209ENST00000450148 AP2A1O95782 977 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 PRSS56P0CW18 603 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 TPH1P17752 444 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 MAP4P27816 1152 aaKnown RBP12.08□□□□□ -0.48
MSH5-209ENST00000450148 HADHAP40939 763 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 PDE1BQ01064 536 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 ABHD18Q0P651 414 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 MAP7Q14244 749 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 OASLQ15646 514 aaKnown RBP12.08□□□□□ -0.48
MSH5-209ENST00000450148 CAPRIN2Q6IMN6 1127 aaKnown RBP12.08□□□□□ -0.48
MSH5-209ENST00000450148 DUS1LQ6P1R4 473 aaKnown RBP12.08□□□□□ -0.48
MSH5-209ENST00000450148 ARHGEF18Q6ZSZ5 1173 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 FAM92BQ6ZTR7 304 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 ZNF605Q86T29 641 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 RNF10Q8N5U6 811 aaKnown RBP12.08□□□□□ -0.48
MSH5-209ENST00000450148 ZSCAN1Q8NBB4 408 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 ATG4AQ8WYN0 398 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 ULK4Q96C45 1275 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 SLC45A3Q96JT2 553 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 SLC41A2Q96JW4 573 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 RMDN2Q96LZ7 410 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 NLE1Q9NVX2 485 aaPredicted RBP12.08□□□□□ -0.48
MSH5-209ENST00000450148 CRLS1Q9UJA2 301 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 ACSL5Q9ULC5 683 aa12.08□□□□□ -0.48
MSH5-209ENST00000450148 IGHV5-51A0A0C4DH38 117 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 KLHL33A6NCF5 533 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 TERTO14746 1132 aaKnown RBP12.07□□□□□ -0.48
MSH5-209ENST00000450148 FAM87AP0C7U9 286 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 FGF5P12034 268 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 ATP1B2P14415 290 aaPredicted RBP12.07□□□□□ -0.48
MSH5-209ENST00000450148 NELFEP18615 380 aaKnown RBP12.07□□□□□ -0.48
MSH5-209ENST00000450148 ITGALP20701 1170 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 F8A1P23610 371 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 MC4RP32245 332 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 P3H1Q32P28 736 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 GPR33Q49SQ1 333 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 CACHD1Q5VU97 1274 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 IRGCQ6NXR0 463 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 PIANPQ8IYJ0 282 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 UNC5BQ8IZJ1 945 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 TXLNBQ8N3L3 684 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 ZFPM2Q8WW38 1151 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 RNF31Q96EP0 1072 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 ZDHHC12Q96GR4 267 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 CDKN2AIPNLQ96HQ2 116 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 C12orf66Q96MD2 445 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 OR6C1Q96RD1 312 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 COPS8Q99627 209 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 MAP3K3Q99759 626 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 LRRC40Q9H9A6 602 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 IMP3Q9NV31 184 aaKnown RBP12.07□□□□□ -0.48
MSH5-209ENST00000450148 ZDHHC3Q9NYG2 299 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 IL17BQ9UHF5 180 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 SLC24A2Q9UI40 661 aa12.07□□□□□ -0.48
MSH5-209ENST00000450148 SNRNP200O75643 2136 aaKnown RBP12.07□□□□□ -0.48
MSH5-209ENST00000450148 CFAP46Q8IYW2 2715 aa12.06□□□□□ -0.48
MSH5-209ENST00000450148 C17orf113A0A1B0GUU1 675 aa12.06□□□□□ -0.48
MSH5-209ENST00000450148 OR5K3A6NET4 321 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms