RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 AVL9Q8NBF6 648 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 WDR36Q8NI36 951 aaKnown RBP14.31□□□□□ -0.12
USP39-206ENST00000448971 NAT14Q8WUY8 206 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 HEXDCQ8WVB3 486 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 CDKN2AIPNLQ96HQ2 116 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 SLC38A3Q99624 504 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 DDX47Q9H0S4 455 aaKnown RBP14.31□□□□□ -0.12
USP39-206ENST00000448971 ZDHHC3Q9NYG2 299 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 KCNK4Q9NYG8 393 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 BFARQ9NZS9 450 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 SLC2A6Q9UGQ3 507 aa14.31□□□□□ -0.12
USP39-206ENST00000448971 ATXN7L1Q9ULK2 861 aaPredicted RBP14.31□□□□□ -0.12
USP39-206ENST00000448971 A6NCN8 305 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 OR51F1A6NGY5 319 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 OR5K4A6NMS3 321 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 NTN3O00634 580 aaPredicted RBP14.3□□□□□ -0.12
USP39-206ENST00000448971 POP7O75817 140 aaKnown RBP14.3□□□□□ -0.12
USP39-206ENST00000448971 TNFSF15O95150 251 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 WISP1O95388 367 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 RPL10P27635 214 aaKnown RBP14.3□□□□□ -0.12
USP39-206ENST00000448971 HALP42357 657 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 FASLGP48023 281 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 CDKN1CP49918 316 aaPredicted RBP14.3□□□□□ -0.12
USP39-206ENST00000448971 OR1D5P58170 312 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 CRADDP78560 199 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 CDK16Q00536 496 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 KCNJ11Q14654 390 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 PCID2Q5JVF3 399 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 PAPD7Q5XG87 772 aaKnown RBP14.3□□□□□ -0.12
USP39-206ENST00000448971 IYDQ6PHW0 289 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 NLRP9Q7RTR0 991 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 ZNF438Q7Z4V0 828 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 C11orf96Q7Z7L8 435 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 SERPINA9Q86WD7 417 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 EXD3Q8N9H8 876 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 OR13J1Q8NGT2 312 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 SGF29Q96ES7 293 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 IL22Q9GZX6 179 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 EPB41L5Q9HCM4 733 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 SARS2Q9NP81 518 aaKnown RBP14.3□□□□□ -0.12
USP39-206ENST00000448971 ASIC3Q9UHC3 531 aa14.3□□□□□ -0.12
USP39-206ENST00000448971 TRBV5-4A0A0C4DH59 114 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 TCRBV7S3A2A0A539 114 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 CCDC162PA2VCL2 907 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 AGAP14A8MT82 685 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 PPM1DO15297 605 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 KCNJ13O60928 360 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 TMEM63AO94886 807 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 GOT2P00505 430 aaKnown RBP14.29□□□□□ -0.12
USP39-206ENST00000448971 ITGA2BP08514 1039 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 MGAT1P26572 445 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 FOXN2P32314 431 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 PAFAH1B1P43034 410 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 MAPK9P45984 424 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 PRLHRP49683 370 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 INHBCP55103 352 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 B4GALNT1Q00973 533 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 NFE2L1Q14494 772 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 NR1D2Q14995 579 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 DBN1Q16643 649 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 LINC00303Q3SY05 128 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 BCL7AQ4VC05 210 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 LRRC8BQ6P9F7 803 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 FOXR1Q6PIV2 292 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 ZNF534Q76KX8 674 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 OTUD6BQ8N6M0 293 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 OR6P1Q8NGX9 317 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 CPT1BQ92523 772 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 HDAC10Q969S8 669 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 SH3KBP1Q96B97 665 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 CXorf40BQ96DE9 158 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 AHCYL2Q96HN2 611 aaKnown RBP14.29□□□□□ -0.12
USP39-206ENST00000448971 ZNF778Q96MU6 729 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 TMEM74Q96NL1 305 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 CCNL2Q96S94 520 aaPredicted RBP14.29□□□□□ -0.12
USP39-206ENST00000448971 FOXP3Q9BZS1 431 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 VPS37BQ9H9H4 285 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 RDH14Q9HBH5 336 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 POT1Q9NUX5 634 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 SYBUQ9NX95 663 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 CPNE7Q9UBL6 633 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 RIMKLBQ9ULI2 386 aa14.29□□□□□ -0.12
USP39-206ENST00000448971 UBR5O95071 2799 aaPredicted RBP14.29□□□□□ -0.12
USP39-206ENST00000448971 CCDC187A0A096LP49 1063 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 OR52A4PA6NMU1 304 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 GOLGA8MH3BSY2 632 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 DUX1O43812 170 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 SLC28A2O43868 658 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 ZFC3H1O60293 1989 aaKnown RBP14.28□□□□□ -0.12
USP39-206ENST00000448971 CPNE6O95741 557 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 VIPP01282 170 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 ATP1B2P14415 290 aaPredicted RBP14.28□□□□□ -0.12
USP39-206ENST00000448971 GPR3P46089 330 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 NPY2RP49146 381 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 DMPKQ09013 629 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 FLNCQ14315 2725 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 ITIH4Q14624 930 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 FASTKD1Q53R41 847 aaKnown RBP14.28□□□□□ -0.12
USP39-206ENST00000448971 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms