RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 UAP1L1Q3KQV9 507 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 ZNF658BQ4V348 819 aaPredicted RBP13.79□□□□□ -0.2
CTSS-202ENST00000448301 C6orf132Q5T0Z8 1188 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 STRA8Q7Z7C7 330 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 KIAA2013Q8IYS2 634 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 OR4C6Q8NH72 309 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 NETO1Q8TDF5 533 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 CYTH2Q99418 400 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 CPNE1Q99829 537 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 MCMBPQ9BTE3 642 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 CCDC68Q9H2F9 335 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 TAAR2Q9P1P5 351 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 DNAJC16Q9Y2G8 782 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 PSAT1Q9Y617 370 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 ASCC3Q8N3C0 2202 aaKnown RBP13.79□□□□□ -0.2
CTSS-202ENST00000448301 FAM186AA6NE01 2351 aa13.79□□□□□ -0.2
CTSS-202ENST00000448301 FFAR2O15552 330 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 CSE1LP55060 971 aaKnown RBP13.78□□□□□ -0.2
CTSS-202ENST00000448301 NFE2L1Q14494 772 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 DEFB133Q30KQ1 61 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 METRNLQ641Q3 311 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 ZNF549Q6P9A3 640 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 XKR5Q6UX68 686 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 CTAGE3PQ8IX95 158 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 LKAAEAR1Q8TD35 194 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 ELMO1Q92556 727 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 KCNJ9Q92806 393 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 CAVIN3Q969G5 261 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 AARSD1Q9BTE6 412 aaKnown RBP13.78□□□□□ -0.2
CTSS-202ENST00000448301 OSGEPL1Q9H4B0 414 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 COG4Q9H9E3 785 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 TXNDC16Q9P2K2 825 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 PCOLCE2Q9UKZ9 415 aa13.78□□□□□ -0.2
CTSS-202ENST00000448301 ARID1BQ8NFD5 2236 aaPredicted RBP13.78□□□□□ -0.2
CTSS-202ENST00000448301 A6NCN8 305 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 IQCF5A8MTL0 148 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 LIN7AO14910 233 aaPredicted RBP13.77□□□□□ -0.21
CTSS-202ENST00000448301 NIPSNAP2O75323 286 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 PIAS1O75925 651 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 TRIM16O95361 564 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 IDSP22304 550 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 GP5P40197 560 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 RPA4Q13156 261 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 EFTUD2Q15029 972 aaKnown RBP eCLIP13.77□□□□□ -0.21
CTSS-202ENST00000448301 KLHL38Q2WGJ6 581 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 AGAP9Q5VTM2 703 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
CTSS-202ENST00000448301 WASH2PQ6VEQ5 465 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 FAM83HQ6ZRV2 1179 aaPredicted RBP13.77□□□□□ -0.21
CTSS-202ENST00000448301 ZC3HC1Q86WB0 502 aaKnown RBP13.77□□□□□ -0.21
CTSS-202ENST00000448301 NAXDQ8IW45 347 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 CFAP206Q8IYR0 622 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 KRT222Q8N1A0 295 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 EID2Q8N6I1 236 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 PPM1NQ8N819 430 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 FAM181AQ8N9Y4 354 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 FAM46DQ8NEK8 389 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 EPB41L4BQ9H329 900 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 RHOJQ9H4E5 214 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 WASH6PQ9NQA3 447 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 LATS2Q9NRM7 1088 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 SPATS2LQ9NUQ6 558 aaKnown RBP13.77□□□□□ -0.21
CTSS-202ENST00000448301 TBC1D29Q9UFV1 150 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 ACSL5Q9ULC5 683 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 BTBD3Q9Y2F9 522 aa13.77□□□□□ -0.21
CTSS-202ENST00000448301 SLC5A10A0PJK1 596 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 E5RI56 91 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 TRIM38O00635 465 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 KPNA5O15131 536 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 F3P13726 295 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 SLC2A4P14672 509 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 ITGB6P18564 788 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 CHRM3P20309 590 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 CD9P21926 228 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 AOAHP28039 575 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 CCR7P32248 378 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 ABCG1P45844 678 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 PLOD1Q02809 727 aaPredicted RBP13.76□□□□□ -0.21
CTSS-202ENST00000448301 BOP1Q14137 746 aaKnown RBP13.76□□□□□ -0.21
CTSS-202ENST00000448301 MAP9Q49MG5 647 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 SYTL3Q4VX76 610 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 RBM20Q5T481 1227 aaKnown RBP13.76□□□□□ -0.21
CTSS-202ENST00000448301 GRTP1Q5TC63 336 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 FAM45BPQ6NSW5 357 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 OGFOD3Q6PK18 319 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 ABRAXAS1Q6UWZ7 409 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 BAHD1Q8TBE0 780 aaPredicted RBP13.76□□□□□ -0.21
CTSS-202ENST00000448301 FAM45AQ8TCE6 357 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 SETD7Q8WTS6 366 aaKnown RBP13.76□□□□□ -0.21
CTSS-202ENST00000448301 ZDHHC1Q8WTX9 485 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 ASZ1Q8WWH4 475 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 VPS39Q96JC1 886 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 NDNQ99608 321 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 RBBP8Q99708 897 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 DPEP2Q9H4A9 486 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 KLHL42Q9P2K6 505 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 FAM8A1Q9UBU6 413 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 MED16Q9Y2X0 877 aa13.76□□□□□ -0.21
CTSS-202ENST00000448301 RIF1Q5UIP0 2472 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms