RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SRFBP1Q8NEF9 429 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TUBGCP5Q96RT8 1024 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CORO1BQ9BR76 489 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 YTHDF1Q9BYJ9 559 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 HSD3B7Q9H2F3 369 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TMEM39AQ9NV64 488 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TBC1D24Q9ULP9 559 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 GRIP1Q9Y3R0 1128 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TESMINQ9Y4I5 508 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 A0A1W2PQH9 124 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 FABP12A6NFH5 140 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 RIIAD1A6NNX1 92 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 EFCAB9A8MZ26 197 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 E9PAM4 449 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PRKD3O94806 890 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CDK14O94921 469 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TAF10Q12962 218 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 DAG1Q14118 895 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PITRM1Q5JRX3 1037 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 THOC7Q6I9Y2 204 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TATDN1Q6P1N9 297 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PACRGLQ8N7B6 248 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 SNX33Q8WV41 574 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 IPCEF1Q8WWN9 437 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TRNT1Q96Q11 434 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 HBEGFQ99075 208 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CNPPD1Q9BV87 410 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ATG10Q9H0Y0 220 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 EQTNQ9NQ60 294 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PLK2Q9NYY3 685 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF214Q9UL59 606 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PRAMEF33A0A0G2JMD5 474 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 OR14I1A6ND48 311 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 MAGEB17A8MXT2 336 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PRAMEF10O60809 474 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PPP1R11O60927 126 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ATG13O75143 517 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TMEM63AO94886 807 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CKMT2P17540 419 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CD52P31358 61 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PBX3P40426 434 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 SLC18A1P54219 525 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CREMQ03060 361 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 SULT2A1Q06520 285 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 SMARCB1Q12824 385 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 MADCAM1Q13477 382 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ZBED5Q49AG3 693 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 NADK2Q4G0N4 442 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 FBXO48Q5FWF7 155 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ATCAYQ86WG3 371 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 LIX1Q8N485 282 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 SLC43A3Q8NBI5 491 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 DNAJB8Q8NHS0 232 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PCDH19Q8TAB3 1148 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ERLEC1Q96DZ1 483 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 MCCC1Q96RQ3 725 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 LRRC3Q9BY71 257 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 EBF2Q9HAK2 575 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 IL1RAPQ9NPH3 570 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 INTS10Q9NVR2 710 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 DMAC2Q9NW81 257 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 C1orf109Q9NX04 203 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 IGSF9Q9P2J2 1179 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PPIEQ9UNP9 301 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 COL1A2P08123 1366 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 A0A1W2PQ72 361 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 NME6O75414 186 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 C1RP00736 705 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CBX5P45973 191 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CCR10P46092 362 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 GDF10P55107 478 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 SRSF11Q05519 484 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CHIT1Q13231 466 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 HNRNPDQ14103 355 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 FAM174BQ3ZCQ3 159 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 KIAA0930Q6ICG6 404 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ANKRD46Q86W74 232 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PPP1R13LQ8WUF5 828 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 GTPBP3Q969Y2 492 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 AZIN2Q96A70 460 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ASB9Q96DX5 294 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF570Q96NI8 536 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TRIM2Q9C040 744 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 BHLHE41Q9C0J9 482 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 HMX1Q9NP08 348 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 EIF2B4Q9UI10 523 aaKnown RBP7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF510Q9Y2H8 683 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 STXBP5LQ9Y2K9 1186 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 A0A1W2PQ67 120 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 SLC15A5A6NIM6 579 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PER2O15055 1255 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CCNDBP1O95273 360 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ESR1P03372 595 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ASGR1P07306 291 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 C8BP07358 591 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ITPKBP27987 946 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 ACADLP28330 430 aa7.68□□□□□ -1.18
NEDD9-204ENST00000448183 RPS14P62263 151 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 PDCD4Q53EL6 469 aaKnown RBP7.68□□□□□ -1.18
NEDD9-204ENST00000448183 CRTC2Q53ET0 693 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms