RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 FADS2P1A8MWK0 482 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 PEX12O00623 359 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 MAFKO60675 156 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 CLDN7O95471 211 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 ZBTB11O95625 1053 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 TPM2P07951 284 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 ZNF7P17097 686 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 IDSP22304 550 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 RPL10P27635 214 aaKnown RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 HTR1EP28566 365 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 CA5AP35218 305 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 TSFMP43897 325 aaKnown RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 HCAR3P49019 387 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 SPINT3P49223 89 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 ZNF165P49910 485 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 EPHB1P54762 984 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 MAXP61244 160 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 PPP1CAP62136 330 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 NR1I3Q14994 352 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 NCF4Q15080 339 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 PLCL1Q15111 1095 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 GPR19Q15760 415 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 SEPT7Q16181 437 aaKnown RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 INSCQ1MX18 579 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 TDRD12Q587J7 1177 aaKnown RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 DNTTIP2Q5QJE6 756 aaKnown RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 ERMARDQ5T6L9 678 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 MARC1Q5VT66 337 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 FAM69BQ5VUD6 431 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 B3GNTL1Q67FW5 361 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 DNAJC24Q6P3W2 148 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 MTFR2Q6P444 385 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 FAM198BQ6UWH4 519 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 CERS6Q6ZMG9 384 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 SPOCD1Q6ZMY3 1216 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 MRGPREQ86SM8 312 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 LRRTM4Q86VH4 590 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 PHF13Q86YI8 300 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 PSTKQ8IV42 348 aaKnown RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 ZNF295-AS1Q8N0V1 137 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 NXPE1Q8N323 547 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 ANKRD20A12PQ8NF67 263 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 NEK11Q8NG66 645 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 NSMCE1Q8WV22 266 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 CLIP3Q96DZ5 547 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 SLX1AQ9BQ83 275 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 C17orf62Q9BQA9 187 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 SYT11Q9BT88 431 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 NAT10Q9H0A0 1025 aaKnown RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 OR2AG1Q9H205 316 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 DHX35Q9H5Z1 703 aaKnown RBP6.92□□□□□ -1.3
LRRC28-203ENST00000447360 FANCEQ9HB96 536 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 SYTL2Q9HCH5 934 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 PCMTD2Q9NV79 361 aa6.92□□□□□ -1.3
LRRC28-203ENST00000447360 A0A1B0GTH6 734 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 SYCE3A1L190 88 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 C9J4A7 227 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 PRICKLE3O43900 615 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 DIAPH2O60879 1101 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 KLF7O75840 302 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 SLC25A14O95258 325 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CD63P08962 238 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 MSL3P1P0C860 447 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CD1EP15812 388 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 HOXB4P17483 251 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CES1P23141 567 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 OTX2P32243 289 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 HALP42357 657 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 MMP13P45452 471 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 ARCN1P48444 511 aaKnown RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CDH6P55285 790 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 RPL26P61254 145 aaKnown RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 RPL7AP62424 266 aaKnown RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 OTUD4Q01804 1114 aaKnown RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 ADCY2Q08462 1091 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 MMRN1Q13201 1228 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 DPYSQ14117 519 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CA9Q16790 459 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CLEC16AQ2KHT3 1053 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 ANKRD20A8PQ5CZ79 823 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 PDPK2PQ6A1A2 396 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 IGFL2Q6UWQ7 119 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 RPTNQ6XPR3 784 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 MRGPRGQ86SM5 289 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 ADGRG6Q86SQ4 1221 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CDH24Q86UP0 819 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 SYTL1Q8IYJ3 562 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 ZNF808Q8N4W9 903 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CCHCR1Q8TD31 782 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 SREK1Q8WXA9 508 aaKnown RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 MCEEQ96PE7 176 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 TRAPPC9Q96Q05 1148 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 SMIM14Q96QK8 99 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 AGPAT1Q99943 283 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 ACTR5Q9H9F9 607 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 ZBTB20Q9HC78 741 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 ATP13A2Q9NQ11 1180 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 GPATCH2LQ9NWQ4 482 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 PKD2L2Q9NZM6 624 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms