RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 GPR21Q99679 349 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 LRRC61Q9BV99 259 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 GTPBP2Q9BX10 602 aaKnown RBP17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 ERVMER34-1Q9H9K5 563 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 NCDNQ9UBB6 729 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 GULP1Q9UBP9 304 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 FETUBQ9UGM5 382 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZNF180Q9UJW8 692 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 MYO15AQ9UKN7 3530 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 VWA7Q9Y334 891 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 COMMD10Q9Y6G5 202 aa17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 GOLGA4Q13439 2230 aaKnown RBP17.68■□□□□ 0.42
TRAPPC4-203ENST00000447216 MGAT4DA6NG13 374 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 TRIM49D1C9J1S8 452 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 F8W8V4 182 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 ARHGAP33O14559 1287 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 RASGRF2O14827 1237 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 VPS26AO75436 327 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 TCEA3O75764 348 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 FDXRP22570 491 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 AOAHP28039 575 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 BLKP51451 505 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 CLCN7P51798 805 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZNF844Q08AG5 666 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 SPEM2Q0P670 501 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 BNIP3Q12983 259 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 BOP1Q14137 746 aaKnown RBP17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZNF460Q14592 562 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 USP10Q14694 798 aaKnown RBP17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZNF658BQ4V348 819 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 XKR5Q6UX68 686 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 TAOK1Q7L7X3 1001 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 NRROSQ86YC3 692 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 CEP97Q8IW35 865 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 CFAP206Q8IYR0 622 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 OR2L2Q8NH16 312 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 GIMAP7Q8NHV1 300 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 LMX1AQ8TE12 382 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 ANKRD7Q92527 254 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 PANX3Q96QZ0 392 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 TIMM29Q9BSF4 260 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 TSSK1BQ9BXA7 367 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 OSGEPL1Q9H4B0 414 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 GAREM1Q9H706 876 aa17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 TRNAU1APQ9NX07 287 aaKnown RBP17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 TSR3Q9UJK0 312 aaKnown RBP17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 DNMT3AQ9Y6K1 912 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC4-203ENST00000447216 FOXO6A8MYZ6 492 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 H3BM21 787 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 PHGDHO43175 533 aaKnown RBP17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 PIAS2O75928 621 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 KRT38O76015 456 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 SYPP08247 313 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 ENGP17813 658 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 GMPRP36959 345 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 PREPP48147 710 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 SLC12A2P55011 1212 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 HNRNPKP61978 463 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 SLC30A9Q6PML9 568 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 CMC1Q7Z7K0 106 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 TDRPQ86YL5 185 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 CYP4X1Q8N118 509 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZBTB2Q8N680 514 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZNF548Q8NEK5 533 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 HM13Q8TCT9 377 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 CD200R1Q8TD46 325 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 KCNJ9Q92806 393 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 ROPN1BQ9BZX4 212 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 COG4Q9H9E3 785 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 ROPN1Q9HAT0 212 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 SPATS2LQ9NUQ6 558 aaKnown RBP17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 UCKL1Q9NWZ5 548 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 TAS2R13Q9NYV9 303 aa17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 TRMT6Q9UJA5 497 aaKnown RBP17.66■□□□□ 0.42
TRAPPC4-203ENST00000447216 A0A1B0GTQ1 180 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 SNX2O60749 519 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 SNRPAP09012 282 aaKnown RBP17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZNF806P0C7X5 589 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 ACTR1BP42025 376 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 RXRGP48443 463 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 ACTR1AP61163 376 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 POU4F1Q01851 419 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 ILF3Q12906 894 aaKnown RBP eCLIP17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 KRT71Q3SY84 523 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 SYTL3Q4VX76 610 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 CEP85LQ5SZL2 805 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 IL27RAQ6UWB1 636 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 LRIG3Q6UXM1 1119 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 OTOAQ7RTW8 1153 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 HDXQ7Z353 690 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 TAF8Q7Z7C8 310 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 VRK3Q8IV63 474 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 GPBAR1Q8TDU6 330 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 TMEM109Q9BVC6 243 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 ZDHHC5Q9C0B5 715 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 PPCSQ9HAB8 311 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 PARD6AQ9NPB6 346 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 EURLQ9NYK6 297 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 SPASTQ9UBP0 616 aa17.65■□□□□ 0.42
TRAPPC4-203ENST00000447216 DHRS7Q9Y394 339 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms