RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 KLHL3Q9UH77 587 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 SERTAD3Q9UJW9 196 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 KIAA1257Q9ULG3 409 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 ITM2BQ9Y287 266 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 ATP8A1Q9Y2Q0 1164 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 MDC1Q14676 2089 aaKnown RBP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 NPIPA5E9PKD4 350 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 CASKO14936 926 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 BNIP3LO60238 219 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 ACVR2AP27037 513 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 AK4P27144 223 aaPredicted RBP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 UQCRC1P31930 480 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 IL13RA1P78552 427 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 DCDP81605 110 aaKnown RBP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 RAP1GAP2Q684P5 730 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 RHBDD2Q6NTF9 364 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 DPPA4Q7L190 304 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 GALNT13Q8IUC8 556 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 ZNF611Q8N823 705 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 OR10H5Q8NGA6 315 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 TMEM174Q8WUU8 243 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 KLHL32Q96NJ5 620 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 SDCBP2Q9H190 292 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 FAM49BQ9NUQ9 324 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 NPIPA1Q9UND3 350 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 A0A0G2JNJ9 132 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 ATMINO43313 823 aaPredicted RBP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 KCNJ13O60928 360 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 IGSF6O95976 241 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 IGHV4-31P0DP07 118 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 CYP2A7P20853 494 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 LIG3P49916 1009 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 RPS4XP62701 263 aaKnown RBP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 CDK3Q00526 305 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 NUCB1Q02818 461 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 ZNF789Q5FWF6 425 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 HIBCHQ6NVY1 386 aaPredicted RBP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 HSFY1Q96LI6 401 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 TKTL2Q9H0I9 626 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 TRIM45Q9H8W5 580 aaPredicted RBP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 NCOA5Q9HCD5 579 aaKnown RBP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 Q9UFV3 132 aa6.12□□□□□ -1.43
BRAFP1-201ENST00000445336 ARHGAP21Q5T5U3 1957 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 A0A1W2PPR1 153 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 UBFD1O14562 309 aaKnown RBP6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 SMAD6O43541 496 aaKnown RBP6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 WFS1O76024 890 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 PPP1R3DO95685 299 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 MAPK9P45984 424 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 CSNK1DP48730 415 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 NRF1Q16656 503 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 B3GNT6Q6ZMB0 384 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 C12orf56Q8IXR9 622 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 C4orf32Q8N8J7 132 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 DQX1Q8TE96 717 aaKnown RBP6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 SAAL1Q96ER3 474 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 AK8Q96MA6 479 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 MLPHQ9BV36 600 aaPredicted RBP6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 RASSF4Q9H2L5 321 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 HCN3Q9P1Z3 774 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 INTUQ9ULD6 942 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 FHOD1Q9Y613 1164 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 A0A1B0GUS0 222 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 A0A1B0GVC2 190 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 E7EQ34 232 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 FRS3O43559 492 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 RECQL5O94762 991 aaPredicted RBP6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 SUN1O94901 812 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 MT-CO1P00395 513 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 F13BP05160 661 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 EBLN1P0CF75 366 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 TNNI1P19237 187 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 POLR2CP19387 275 aaPredicted RBP6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 RRM1P23921 792 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 PSMA5P28066 241 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 CCR1P32246 355 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 MCM7P33993 719 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 CYP24A1Q07973 514 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 BIRC3Q13489 604 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 KCTD16Q68DU8 428 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 H3F3CQ6NXT2 135 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 LINC00696Q6ZRV3 163 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 AOPEPQ8N6M6 819 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 GTF3AQ92664 365 aaKnown RBP6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 DLG3Q92796 817 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 CDK5RAP3Q96JB5 506 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 SCYL1Q96KG9 808 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 MOSPD1Q9UJG1 213 aa6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 NOL7Q9UMY1 257 aaKnown RBP6.11□□□□□ -1.43
BRAFP1-201ENST00000445336 EML6Q6ZMW3 1958 aa6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 YJEFN3A6XGL0 299 aa6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 ASS1P00966 412 aaKnown RBP6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 VIPP01282 170 aa6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 CCDC166P0CW27 439 aa6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 CRYGSP22914 178 aa6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 TOB1P50616 345 aaPredicted RBP6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 POLR2LP62875 67 aaKnown RBP6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 SF3B4Q15427 424 aaKnown RBP eCLIP6.1□□□□□ -1.43
BRAFP1-201ENST00000445336 STILQ15468 1287 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms