RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 VPS35Q96QK1 796 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 FAM83CQ9BQN1 747 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 TRIM54Q9BYV2 358 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 EBF3Q9H4W6 596 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 CERS4Q9HA82 394 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 H0Y3Z8 333 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 PPP6CO00743 305 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 FTH1P02794 183 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 SNRPB2P08579 225 aaKnown RBP15.43■□□□□ 0.06
SNX13-204ENST00000444712 ELFN1P0C7U0 828 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 IDO1P14902 403 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 MSH3P20585 1137 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 GCKP35557 465 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 MRPL19P49406 292 aaKnown RBP15.43■□□□□ 0.06
SNX13-204ENST00000444712 FOXA1P55317 472 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 CDKL1Q00532 357 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 B4GALNT1Q00973 533 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 ELP6Q0PNE2 266 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 GRIK2Q13002 908 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 SP140Q13342 867 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 KIF19Q2TAC6 998 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 AGKQ53H12 422 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 LRRC73Q5JTD7 316 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 LDLRAP1Q5SW96 308 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 HENMT1Q5T8I9 393 aaKnown RBP15.43■□□□□ 0.06
SNX13-204ENST00000444712 NEK10Q6ZWH5 1172 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 HSD11B1LQ7Z5J1 315 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNX13-204ENST00000444712 DDHD1Q8NEL9 900 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 MYLIPQ8WY64 445 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 C3orf30Q96M34 536 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 ZFP14Q9HCL3 533 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 WWOXQ9NZC7 414 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 NKX1-2Q9UD57 310 aaPredicted RBP15.43■□□□□ 0.06
SNX13-204ENST00000444712 ANGPTL3Q9Y5C1 460 aa15.43■□□□□ 0.06
SNX13-204ENST00000444712 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.42■□□□□ 0.06
SNX13-204ENST00000444712 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.42■□□□□ 0.06
SNX13-204ENST00000444712 ATP6AP2A0A1C7CYW4 349 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 SLC16A5O15375 505 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 NUAK1O60285 661 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 ATP6AP2O75787 350 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 ANXA5P08758 320 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 GNAZP19086 355 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 ITGB7P26010 798 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 AOAHP28039 575 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 MAGEA10P43363 369 aaPredicted RBP15.42■□□□□ 0.06
SNX13-204ENST00000444712 RALGDSQ12967 914 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 GBX1Q14549 363 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 HNRNPA1L2Q32P51 320 aaKnown RBP15.42■□□□□ 0.06
SNX13-204ENST00000444712 SWT1Q5T5J6 900 aaKnown RBP15.42■□□□□ 0.06
SNX13-204ENST00000444712 GOLGA7Q7Z5G4 137 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 MYLK4Q86YV6 388 aaPredicted RBP15.42■□□□□ 0.06
SNX13-204ENST00000444712 MIER2Q8N344 545 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 GDPD5Q8WTR4 605 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 KCNA7Q96RP8 456 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 APOL5Q9BWW9 433 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 WDR41Q9HAD4 459 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 OPTCQ9UBM4 332 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 POLG2Q9UHN1 485 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 CD84Q9UIB8 345 aa15.42■□□□□ 0.06
SNX13-204ENST00000444712 KPNA3O00505 521 aaPredicted RBP15.41■□□□□ 0.06
SNX13-204ENST00000444712 MATN4O95460 622 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 SLC34A1Q06495 639 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 ELAVL3Q14576 367 aaKnown RBP15.41■□□□□ 0.06
SNX13-204ENST00000444712 XKR7Q5GH72 579 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 HACD2Q6Y1H2 254 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 TMEM184AQ6ZMB5 413 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 GK5Q6ZS86 529 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 RFLNAQ6ZTI6 216 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 PARS2Q7L3T8 475 aaKnown RBP15.41■□□□□ 0.06
SNX13-204ENST00000444712 DSG4Q86SJ6 1040 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 PHYKPLQ8IUZ5 450 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 ATP6V1E2Q96A05 226 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 PBX4Q9BYU1 374 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 CD244Q9BZW8 370 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 NKX2-4Q9H2Z4 354 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 TUBB1Q9H4B7 451 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 NOL11Q9H8H0 719 aaKnown RBP15.41■□□□□ 0.06
SNX13-204ENST00000444712 TMEM45AQ9NWC5 275 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 CCDC167Q9P0B6 97 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 C15orf41Q9Y2V0 281 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 COL4A3Q01955 1670 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 KRT36O76013 467 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 OR4F21O95013 312 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 LINC00032P0C843 101 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 PRR35P0CG20 571 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 HGFP14210 728 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 CCR7P32248 378 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 PBX2P40425 430 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 RPS6KA2Q15349 733 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 GAB4Q2WGN9 574 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 FBXO48Q5FWF7 155 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 LIPIQ6XZB0 460 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 RNF165Q6ZSG1 346 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 Q6ZVL8 140 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 CYP2U1Q7Z449 544 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 TECPR1Q7Z6L1 1165 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 TERB1Q8NA31 727 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 PCYOX1LQ8NBM8 494 aa15.41■□□□□ 0.06
SNX13-204ENST00000444712 TSPEARQ8WU66 669 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms